RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 RCAN1P53805 252 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 IGBP1P78318 339 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 HTRA4P83105 476 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 ST3GAL1Q11201 340 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 MARCH8Q5T0T0 291 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 LARP1BQ659C4 914 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 WWC2Q6AWC2 1192 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 MCTP1Q6DN14 999 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 HEATR3Q7Z4Q2 680 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 NECAB1Q8N987 351 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 FANCBQ8NB91 859 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 TMEM87AQ8NBN3 555 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 TRAPPC12Q8WVT3 735 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 CUL5Q93034 780 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 TGS1Q96RS0 853 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 FAM217BQ9NTX9 383 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 SEC63Q9UGP8 760 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 UBIAD1Q9Y5Z9 338 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 ATG2AQ2TAZ0 1938 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 CNTNAP5Q8WYK1 1306 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 STAM2O75886 525 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 CSPG5O95196 566 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 AMHP03971 560 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 GHRP10912 638 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 SMARCA1P28370 1054 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 PDIA3P30101 505 aaKnown RBP10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 CDC27P30260 824 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 DEKP35659 375 aaKnown RBP10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 MGAT3Q09327 533 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 TMEM62Q0P6H9 643 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 FUT2Q10981 343 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 TRAF1Q13077 416 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 EPC2Q52LR7 807 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 NLRX1Q86UT6 975 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 SGMS1Q86VZ5 419 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 DNAJB3Q8WWF6 145 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 HLA-CQ95604 372 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 TOP1MTQ969P6 601 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 SENP7Q9BQF6 1050 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 LARP6Q9BRS8 491 aaKnown RBP10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 ZSCAN16Q9H4T2 348 aaPredicted RBP10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 JADE2Q9NQC1 790 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 LMBRD1Q9NUN5 540 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 MTMR6Q9Y217 621 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 SLC12A7Q9Y666 1083 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 KAT6AQ92794 2004 aa10.67□□□□□ -0.7
TMEM39A-208ENST00000486159 LOXHD1Q8IVV2 1947 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 NLRC5Q86WI3 1866 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 CDKL5O76039 1030 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 LINC00271P0C7V0 271 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 APOBRQ0VD83 1088 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 SCRN1Q12765 414 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 LPIN1Q14693 890 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 GRIK4Q16099 956 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 FAM26DQ5JW98 314 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 L1TD1Q5T7N2 865 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 ATL3Q6DD88 541 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 CPLX2Q6PUV4 134 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 APOA5Q6Q788 366 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 RTN4RL1Q86UN2 441 aaPredicted RBP10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 FAM184AQ8NB25 1140 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 FBXO22Q8NEZ5 403 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 LINC01599Q8WXQ3 324 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 SEPT1Q8WYJ6 367 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 SEPT8Q92599 483 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 GPRASP2Q96D09 838 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 LZTS2Q9BRK4 669 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 AGO3Q9H9G7 860 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 INSL6Q9Y581 213 aa10.66□□□□□ -0.7
TMEM39A-208ENST00000486159 PKD1L2Q7Z442 2459 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 EMSYQ7Z589 1322 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 MUC6Q6W4X9 2439 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 DDX39AO00148 427 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 STXBP3O00186 592 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 ENPP3O14638 875 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 INSRRP14616 1297 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 IL9P15248 144 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 GNAQP50148 359 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 PPFIA1Q13136 1202 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 ITGB3BPQ13352 177 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 MTMR1Q13613 665 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 SYNE3Q6ZMZ3 975 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 TMEM192Q8IY95 271 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 NSUN7Q8NE18 718 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 GLG1Q92896 1179 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 SYAP1Q96A49 352 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 YME1L1Q96TA2 773 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 MXRA8Q9BRK3 442 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 IFIH1Q9BYX4 1025 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 FAM49AQ9H0Q0 323 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 UBE2ZQ9H832 354 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 EHMT1Q9H9B1 1298 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 KCNH7Q9NS40 1196 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 RYDENQ9NUL5 291 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 ZNF215Q9UL58 517 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 COG5Q9UP83 839 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms