RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 FRS2Q8WU20 508 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 APPBP2Q92624 585 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 RPGRQ92834 1020 aaKnown RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 SNX21Q969T3 373 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 DACT3Q96B18 629 aaPredicted RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 ATG4CQ96DT6 458 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 EAF1Q96JC9 268 aaPredicted RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 CHST12Q9NRB3 414 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 ZBTB40Q9NUA8 1239 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 FANCLQ9NW38 375 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 MBD1Q9UIS9 605 aaPredicted RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 GTF2A1LQ9UNN4 478 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 CPSF1Q10570 1443 aaKnown RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 PTCH1Q13635 1447 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 ALKQ9UM73 1620 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 FAM170AA1A519 330 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 OTOL1A6NHN0 477 aaPredicted RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 PES1O00541 588 aaKnown RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 ORC4O43929 436 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 DIAPH1O60610 1272 aaKnown RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 VAMP4O75379 141 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 IFIT2P09913 472 aaKnown RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 ZNF853P0CG23 659 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 TGFB3P10600 412 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 PI3P19957 117 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 PDE1CQ14123 709 aaPredicted RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 MORC3Q14149 939 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 NFIXQ14938 502 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 SNX17Q15036 470 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 CLEC16AQ2KHT3 1053 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 ZNF394Q53GI3 561 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 BRDTQ58F21 947 aaPredicted RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 TCERG1LQ5VWI1 586 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 SLC4A10Q6U841 1118 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 NLRX1Q86UT6 975 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 USP48Q86UV5 1035 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 ZNF354CQ86Y25 554 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 RAVER1Q8IY67 606 aaKnown RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 SSH1Q8WYL5 1049 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 GPR101Q96P66 508 aaPredicted RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 IWS1Q96ST2 819 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 LRRC3Q9BY71 257 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 SUDS3Q9H7L9 328 aaPredicted RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 GMIPQ9P107 970 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 SIRPGQ9P1W8 387 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 GPR160Q9UJ42 338 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 TMCC3Q9ULS5 477 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 SMC3Q9UQE7 1217 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 RRP7AQ9Y3A4 280 aaKnown RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 PCDHGB7Q9Y5F8 929 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 SPATA31D1Q6ZQQ2 1576 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 ROBO2Q9HCK4 1378 aa4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 CDK12Q9NYV4 1490 aaPredicted RBP4.66□□□□□ -1.66
PRPF38B-205ENST00000485810 FSD2A1L4K1 749 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 PRRT4C9JH25 899 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 TCEA3O75764 348 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 ALDH1L1O75891 902 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 ATE1O95260 518 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 FGRP09769 529 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 DDIT3P35638 169 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 PIK3CAP42336 1068 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 MASP1P48740 699 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 EPHB3P54753 998 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 NUCB1Q02818 461 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 EXOSC9Q06265 439 aaKnown RBP4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 SERINC3Q13530 473 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 MLECQ14165 292 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 ZNF385BQ569K4 471 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 BMP2KLQ5H9B9 411 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 HYIQ5T013 277 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 NBPF12Q5TAG4 269 aaPredicted RBP4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 PDXDC1Q6P996 788 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 ZPBP2Q6X784 338 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 HOMER1Q86YM7 354 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 SIRT2Q8IXJ6 389 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 FAM43AQ8N2R8 423 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 NKD1Q969G9 470 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 GCC1Q96CN9 775 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 SPON2Q9BUD6 331 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 ASPNQ9BXN1 380 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 TSPY26PQ9H489 355 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 EHMT1Q9H9B1 1298 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 SMC4Q9NTJ3 1288 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 CHMP5Q9NZZ3 219 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 TNNQ9UQP3 1299 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 TECPR2O15040 1411 aa4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 EDC4Q6P2E9 1401 aaKnown RBP4.65□□□□□ -1.66
PRPF38B-205ENST00000485810 SETD1AO15047 1707 aaKnown RBP4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 TRIM64CA6NLI5 447 aa4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 IPO5O00410 1097 aaKnown RBP4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 MEIS1O00470 390 aa4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 RPL10P27635 214 aaKnown RBP4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 CNGA1P29973 690 aa4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 NAP1L1P55209 391 aaKnown RBP4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 NMIQ13287 307 aaPredicted RBP4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 TRIM29Q14134 588 aa4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 TOMM20Q15388 145 aa4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 ANO1Q5XXA6 986 aa4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 IQCEQ6IPM2 695 aa4.65□□□□□ -1.67
PRPF38B-205ENST00000485810 NLRC3Q7RTR2 1065 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms