RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 AFG1LQ8WV93 481 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 DPF3Q92784 378 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 CUL5Q93034 780 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 GTF3C6Q969F1 213 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 GPRASP2Q96D09 838 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 GLT1D1Q96MS3 346 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 MBOAT7Q96N66 472 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 C16orf70Q9BSU1 422 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 SPC25Q9HBM1 224 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 JADE2Q9NQC1 790 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 STARD7Q9NQZ5 370 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 TRMT13Q9NUP7 481 aaKnown RBP6.55□□□□□ -1.36
CUX1-208ENST00000485792 PCDHA6Q9UN73 950 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 PCDHA8Q9Y5H6 950 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 MUC3AQ02505 3323 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 BRWD1Q9NSI6 2320 aa6.55□□□□□ -1.36
CUX1-208ENST00000485792 NFASCO94856 1347 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 CYP3A7-CYP3A51PA0A087WV96 503 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 IGKV6D-21A0A0A0MT36 114 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 SMCO2A6NFE2 343 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 KIF28PB7ZC32 967 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 FIBPO43427 364 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 SLC37A4O43826 429 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 DEXIO95424 95 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 GH1P01241 217 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 CYP3A7P24462 503 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 MMP16P51512 607 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 ITGA7Q13683 1181 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 ANKRD1Q15327 319 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 LRIT3Q3SXY7 679 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 HABP4Q5JVS0 413 aaKnown RBP6.54□□□□□ -1.36
CUX1-208ENST00000485792 MCTP2Q6DN12 878 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 GDF6Q6KF10 455 aaPredicted RBP6.54□□□□□ -1.36
CUX1-208ENST00000485792 METTL7BQ6UX53 244 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 B3GNT9Q6UX72 402 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 SEPT14Q6ZU15 432 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 BANK1Q8NDB2 785 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 SMARCC2Q8TAQ2 1214 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 TSC1Q92574 1164 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 TBC1D32Q96NH3 1257 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 MXRA8Q9BRK3 442 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 ANO3Q9BYT9 981 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 SLC6A16Q9GZN6 736 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 AP5M1Q9H0R1 490 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 TRPV6Q9H1D0 765 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 RTEL1Q9NZ71 1219 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 KCNJ14Q9UNX9 436 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 ATP11BQ9Y2G3 1177 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 NCOR1O75376 2440 aa6.54□□□□□ -1.36
CUX1-208ENST00000485792 GSTTP1A0A1W2PQM5 241 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 ZBTB42B2RXF5 422 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 ZEB2O60315 1214 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 PQBP1O60828 265 aaKnown RBP6.53□□□□□ -1.36
CUX1-208ENST00000485792 LGR5O75473 907 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 TDP2O95551 362 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 GGPS1O95749 300 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 S1PR4O95977 384 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 TIMP1P01033 207 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 CLTBP09497 229 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 CYP2C9P11712 490 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 MYCLP12524 364 aaPredicted RBP6.53□□□□□ -1.36
CUX1-208ENST00000485792 ATP4AP20648 1035 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 GNA11P29992 359 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 USP11P51784 963 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 ADCY7P51828 1080 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 NEK4P51957 841 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 NAPAP54920 295 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 NEDD9Q14511 834 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 UGCGQ16739 394 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 DGKDQ16760 1214 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 NBPF20Q3BBV1 942 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 GNPTABQ3T906 1256 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 CEP55Q53EZ4 464 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 JAKMIP3Q5VZ66 844 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 GALNT17Q6IS24 598 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 GIMAP8Q8ND71 665 aaPredicted RBP6.53□□□□□ -1.36
CUX1-208ENST00000485792 OR6J1Q8NGC5 347 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 CCDC12Q8WUD4 166 aaPredicted RBP6.53□□□□□ -1.36
CUX1-208ENST00000485792 CDHR1Q96JP9 859 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 GPR20Q99678 358 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 MTG1Q9BT17 334 aaPredicted RBP6.53□□□□□ -1.36
CUX1-208ENST00000485792 PHF20Q9BVI0 1012 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 NOC4LQ9BVI4 516 aaKnown RBP6.53□□□□□ -1.36
CUX1-208ENST00000485792 SLC26A6Q9BXS9 759 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 BACH2Q9BYV9 841 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 KCNH7Q9NS40 1196 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 PKD2L1Q9P0L9 805 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 WRAP73Q9P2S5 460 aaPredicted RBP6.53□□□□□ -1.36
CUX1-208ENST00000485792 MRVI1Q9Y6F6 885 aa6.53□□□□□ -1.36
CUX1-208ENST00000485792 MYO7AQ13402 2215 aa6.52□□□□□ -1.37
CUX1-208ENST00000485792 SPDYE3A6NKU9 549 aa6.52□□□□□ -1.37
CUX1-208ENST00000485792 DCDC2CA8MYV0 355 aa6.52□□□□□ -1.37
CUX1-208ENST00000485792 STBD1O95210 358 aa6.52□□□□□ -1.37
CUX1-208ENST00000485792 LGALS2P05162 132 aa6.52□□□□□ -1.37
CUX1-208ENST00000485792 ARHGAP4P98171 946 aa6.52□□□□□ -1.37
CUX1-208ENST00000485792 FGD1P98174 961 aa6.52□□□□□ -1.37
CUX1-208ENST00000485792 SSRP1Q08945 709 aaKnown RBP6.52□□□□□ -1.37
CUX1-208ENST00000485792 SPIRE1Q08AE8 756 aa6.52□□□□□ -1.37
CUX1-208ENST00000485792 NR5A1Q13285 461 aa6.52□□□□□ -1.37
CUX1-208ENST00000485792 MCM6Q14566 821 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms