RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 SH3TC2Q8TF17 1288 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 TNMDQ9H2S6 317 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 SPC25Q9HBM1 224 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 HMX1Q9NP08 348 aaPredicted RBP19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 TMEM63CQ9P1W3 806 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 DDX20Q9UHI6 824 aaKnown RBP19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 HOOK1Q9UJC3 728 aaKnown RBP19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 HTTP42858 3142 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 E9PMD0 336 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 ZNF862O60290 1169 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 LGALS2P05162 132 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 GJA9P57773 515 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 PSMC6P62333 389 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 UTP14CQ5TAP6 766 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 FBXO46Q6PJ61 603 aaPredicted RBP19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 GLG1Q92896 1179 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 SMARCAD1Q9H4L7 1026 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 KBTBD4Q9NVX7 518 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 SCN10AQ9Y5Y9 1956 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 CTAGE5O15320 804 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 PLA2G4BP0C869 781 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 YWHABP31946 246 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 SLC26A2P50443 739 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 MCM6Q14566 821 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 PKN2Q16513 984 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 FSCN1Q16658 493 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 PLPPR4Q7Z2D5 763 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 TRIM50Q86XT4 487 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 PIGOQ8TEQ8 1089 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 FAM167AQ96KS9 214 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 CCDC43Q96MW1 224 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 XPNPEP3Q9NQH7 507 aa19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 DBR1Q9UK59 544 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 ZNF215Q9UL58 517 aaPredicted RBP19.79■□□□□ 0.76
SMARCD3-212ENST00000485610 OATP04181 439 aa19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 C6orf222P0C671 652 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 ZNF286BP0CG31 522 aa19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 XRCC6P12956 609 aaKnown RBP eCLIP19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 NKX3-2P78367 333 aa19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 XKR3Q5GH77 459 aa19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 SV2BQ7L1I2 683 aa19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 SH3RF1Q7Z6J0 888 aa19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 CKAP2LQ8IYA6 745 aa19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 PAGE5Q96GU1 130 aa19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 ANKEF1Q9NU02 776 aa19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 ERAP1Q9NZ08 941 aa19.78■□□□□ 0.76
SMARCD3-212ENST00000485610 SSBP05455 408 aaKnown RBP eCLIP19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 MYL1P05976 194 aa19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 AFMP43652 599 aa19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 AMPD3Q01432 767 aa19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 POSTNQ15063 836 aa19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 CAMK4Q16566 473 aa19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 OTUD6AQ7L8S5 288 aa19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 GRAMD1CQ8IYS0 662 aa19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 LRRC27Q9C0I9 530 aa19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 BHMT2Q9H2M3 363 aa19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 SEPT9Q9UHD8 586 aaPredicted RBP19.77■□□□□ 0.76
SMARCD3-212ENST00000485610 EVPLQ92817 2033 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 A0A087WWV3 80 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 ARHGEF35A5YM69 484 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 GTPBP6O43824 516 aaPredicted RBP19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 ADAMTS4O75173 837 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 STBD1O95210 358 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 ATP4AP20648 1035 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 SLC12A3P55017 1021 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 BEX3Q00994 111 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 DHX8Q14562 1220 aaKnown RBP19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 ANO5Q75V66 913 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 SYT2Q8N9I0 419 aaPredicted RBP19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 MTRQ99707 1265 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 C16orf70Q9BSU1 422 aa19.76■□□□□ 0.75
SMARCD3-212ENST00000485610 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 ZBTB39O15060 712 aa19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 ZEB2O60315 1214 aa19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 KPNA6O60684 536 aa19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 PGK1P00558 417 aa19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 CST5P28325 142 aaPredicted RBP19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 RARRES1P49788 294 aa19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 GPBP1Q86WP2 473 aa19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 ATP8B4Q8TF62 1192 aa19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 BBXQ8WY36 941 aaPredicted RBP19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 STAMQ92783 540 aa19.75■□□□□ 0.75
SMARCD3-212ENST00000485610 MYADML2A6NDP7 307 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 F2P00734 622 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 PRR29P0C7W0 189 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 MARK3P27448 753 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 IRX5P78411 483 aaPredicted RBP19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 MDM2Q00987 491 aaPredicted RBP19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 PNOCQ13519 176 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 PLCB4Q15147 1175 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 XKR9Q5GH70 373 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 GNASQ5JWF2 1037 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 PLA2G4FQ68DD2 849 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 RBM43Q6ZSC3 357 aaKnown RBP19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 C7orf25Q9BPX7 421 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 UNC93B1Q9H1C4 597 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 NRBP2Q9NSY0 501 aa19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 TRIP12Q14669 1992 aaPredicted RBP19.74■□□□□ 0.75
SMARCD3-212ENST00000485610 TMEM150BA6NC51 233 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms