RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 NUDT8Q8WV74 236 aa8.72□□□□□ -1.01
CLRN1-206ENST00000485607 RNPC3Q96LT9 517 aaKnown RBP8.72□□□□□ -1.01
CLRN1-206ENST00000485607 GLT1D1Q96MS3 346 aa8.72□□□□□ -1.01
CLRN1-206ENST00000485607 CDX2Q99626 313 aaPredicted RBP8.72□□□□□ -1.01
CLRN1-206ENST00000485607 RANBP17Q9H2T7 1088 aaKnown RBP8.72□□□□□ -1.01
CLRN1-206ENST00000485607 JPH1Q9HDC5 661 aaPredicted RBP8.72□□□□□ -1.01
CLRN1-206ENST00000485607 GNEQ9Y223 722 aaKnown RBP8.72□□□□□ -1.01
CLRN1-206ENST00000485607 GRIN2DO15399 1336 aa8.72□□□□□ -1.01
CLRN1-206ENST00000485607 ELP1O95163 1332 aa8.72□□□□□ -1.01
CLRN1-206ENST00000485607 ZMYM6O95789 1325 aa8.72□□□□□ -1.01
CLRN1-206ENST00000485607 NEDD4P46934 1319 aa8.72□□□□□ -1.01
CLRN1-206ENST00000485607 LCTP09848 1927 aa8.72□□□□□ -1.01
CLRN1-206ENST00000485607 MCM3APO60318 1980 aa8.72□□□□□ -1.01
CLRN1-206ENST00000485607 A0A0A0MRY4 1105 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 ARVCFO00192 962 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 TIMP1P01033 207 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 PDHBP11177 359 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 SELPP16109 830 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 SDSP20132 328 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 NKX3-2P78367 333 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 SMAD3P84022 425 aaKnown RBP8.71□□□□□ -1.02
CLRN1-206ENST00000485607 BAATQ14032 418 aaPredicted RBP8.71□□□□□ -1.02
CLRN1-206ENST00000485607 FSCN1Q16658 493 aaKnown RBP8.71□□□□□ -1.02
CLRN1-206ENST00000485607 SHISA2Q6UWI4 295 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 BTNL9Q6UXG8 535 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 C20orf204Q6ZNR8 217 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 NOL8Q76FK4 1167 aaKnown RBP8.71□□□□□ -1.02
CLRN1-206ENST00000485607 TLK2Q86UE8 772 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 PLEKHM2Q8IWE5 1019 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 PCSK9Q8NBP7 692 aaKnown RBP8.71□□□□□ -1.02
CLRN1-206ENST00000485607 EXOC6Q8TAG9 804 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 CLEC4DQ8WXI8 215 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 MYLIPQ8WY64 445 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 RILPL2Q969X0 211 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 VTI1AQ96AJ9 217 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.71□□□□□ -1.02
CLRN1-206ENST00000485607 ZKSCAN3Q9BRR0 538 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 PPP1R12CQ9BZL4 782 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 CPVLQ9H3G5 476 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 SPC25Q9HBM1 224 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 UMODL1Q5DID0 1318 aa8.71□□□□□ -1.02
CLRN1-206ENST00000485607 A0A0U1RQG5 324 aaPredicted RBP8.7□□□□□ -1.02
CLRN1-206ENST00000485607 ASB14A6NK59 587 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 DYNC1LI2O43237 492 aaPredicted RBP8.7□□□□□ -1.02
CLRN1-206ENST00000485607 CD4P01730 458 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 GOLGA8HP0CJ92 632 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 SNHG28P0DPA3 235 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 ACRP10323 421 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 CSF2RAP15509 400 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 PSMC6P62333 389 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 NUCB1Q02818 461 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 ZNF543Q08ER8 600 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 AKNAD1Q5T1N1 836 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 MFSD5Q6N075 450 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 CHD1LQ86WJ1 897 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 SLC43A3Q8NBI5 491 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 MORC4Q8TE76 937 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 IL25Q9H293 177 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 TCP11L1Q9NUJ3 509 aa8.7□□□□□ -1.02
CLRN1-206ENST00000485607 GRXCR1A8MXD5 290 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 HYAL3O43820 417 aaPredicted RBP8.69□□□□□ -1.02
CLRN1-206ENST00000485607 CALML3P27482 149 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 CYP2C18P33260 490 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 ALDH5A1P51649 535 aaPredicted RBP8.69□□□□□ -1.02
CLRN1-206ENST00000485607 EPHA4P54764 986 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 CWC27Q6UX04 472 aaKnown RBP8.69□□□□□ -1.02
CLRN1-206ENST00000485607 MFSD6Q6ZSS7 791 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.69□□□□□ -1.02
CLRN1-206ENST00000485607 TPCN2Q8NHX9 752 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 PPP1R13LQ8WUF5 828 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 PHACTR1Q9C0D0 580 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 AP5M1Q9H0R1 490 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 TRPV6Q9H1D0 765 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 VTA1Q9NP79 307 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 MROH7Q68CQ1 1323 aa8.69□□□□□ -1.02
CLRN1-206ENST00000485607 PTPDC1A2A3K4 754 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 RBAK-RBAKDNI3L0D1 243 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 B4GALT4O60513 344 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 PSMA6P60900 246 aaKnown RBP8.68□□□□□ -1.02
CLRN1-206ENST00000485607 ITGA7Q13683 1181 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 USH1GQ495M9 461 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 TMEM240Q5SV17 173 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 RASIP1Q5U651 963 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 IQSEC1Q6DN90 963 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 RNF207Q6ZRF8 634 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 KIAA1211Q6ZU35 1233 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 ZNF365Q70YC5 407 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 TICAM2Q86XR7 235 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 DMRTC2Q8IXT2 367 aaPredicted RBP8.68□□□□□ -1.02
CLRN1-206ENST00000485607 MAFAQ8NHW3 353 aaPredicted RBP8.68□□□□□ -1.02
CLRN1-206ENST00000485607 VWCEQ96DN2 955 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 SUSD3Q96L08 255 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 TTC14Q96N46 770 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 UBA5Q9GZZ9 404 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 WNT8AQ9H1J5 351 aa8.68□□□□□ -1.02
CLRN1-206ENST00000485607 RWDD1Q9H446 243 aaPredicted RBP8.68□□□□□ -1.02
CLRN1-206ENST00000485607 CXXC1Q9P0U4 656 aaPredicted RBP8.68□□□□□ -1.02
CLRN1-206ENST00000485607 CHD7Q9P2D1 2997 aa8.67□□□□□ -1.02
CLRN1-206ENST00000485607 B4E1Z4 1266 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms