RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 POLR2MP0CAP2 368 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 TXNP10599 105 aaKnown RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 LIFRP42702 1097 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 IRX6P78412 446 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 PTPN11Q06124 597 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 FAAP100Q0VG06 881 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 ITGA7Q13683 1181 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 GRM4Q14833 912 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 ARHGEF16Q5VV41 709 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 MFSD5Q6N075 450 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 XRRA1Q6P2D8 792 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 NFRKBQ6P4R8 1299 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 PSRC1Q6PGN9 363 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 SLC30A10Q6XR72 485 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 SYNE3Q6ZMZ3 975 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 NFXL1Q6ZNB6 911 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 EEPD1Q7L9B9 569 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 RPUSD2Q8IZ73 545 aaKnown RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 ALDH16A1Q8IZ83 802 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 DEFB123Q8N688 67 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 SLC43A3Q8NBI5 491 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 SYTL5Q8TDW5 730 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 GTPBP3Q969Y2 492 aaKnown RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 TRIM43Q96BQ3 446 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 LENG1Q96BZ8 264 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 MTMR8Q96EF0 704 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 MTG1Q9BT17 334 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 RIOX1Q9H6W3 641 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 VAT1LQ9HCJ6 419 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 NEUROD4Q9HD90 331 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 SEC63Q9UGP8 760 aaKnown RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 MAD2L2Q9UI95 211 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 TBX21Q9UL17 535 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 RBM8AQ9Y5S9 174 aaKnown RBP7.12□□□□□ -1.27
PTCD3-215ENST00000484203 DNAH12Q6ZR08 3092 aa7.12□□□□□ -1.27
PTCD3-215ENST00000484203 BAZ2AQ9UIF9 1905 aaKnown RBP7.11□□□□□ -1.27
PTCD3-215ENST00000484203 A0A0C4DFX4 3053 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-215ENST00000484203 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-215ENST00000484203 CCDC69A6NI79 296 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 CTAGE5O15320 804 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 PARNO95453 639 aaKnown RBP7.11□□□□□ -1.27
PTCD3-215ENST00000484203 CFBP00751 764 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 GH1P01241 217 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 NEFLP07196 543 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 THBS1P07996 1170 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 PFKMP08237 780 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 CASTP20810 708 aaKnown RBP7.11□□□□□ -1.27
PTCD3-215ENST00000484203 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-215ENST00000484203 HSD17B4P51659 736 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 PTH1RQ03431 593 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 TROAPQ12815 778 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 LAMC2Q13753 1193 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 LBRQ14739 615 aaKnown RBP7.11□□□□□ -1.27
PTCD3-215ENST00000484203 DGKDQ16760 1214 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 GNPTABQ3T906 1256 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 CXCL17Q6UXB2 119 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 STOX1Q6ZVD7 989 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 CYB5R4Q7L1T6 521 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 RASGRP2Q7LDG7 609 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 FAM126BQ8IXS8 530 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 OR6J1Q8NGC5 347 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 IGDCC4Q8TDY8 1250 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 CLP1Q92989 425 aaKnown RBP7.11□□□□□ -1.27
PTCD3-215ENST00000484203 CUL5Q93034 780 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 RRP36Q96EU6 259 aaKnown RBP7.11□□□□□ -1.27
PTCD3-215ENST00000484203 RNPC3Q96LT9 517 aaKnown RBP7.11□□□□□ -1.27
PTCD3-215ENST00000484203 KATNAL1Q9BW62 490 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 SPZ1Q9BXG8 430 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 ANO2Q9NQ90 1003 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 PDGFCQ9NRA1 345 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 MYH7P12883 1935 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 PLXNB2O15031 1838 aa7.11□□□□□ -1.27
PTCD3-215ENST00000484203 ASTN1O14525 1302 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 RLFQ13129 1914 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-215ENST00000484203 CARNS1A5YM72 827 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 MYADML2A6NDP7 307 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 ADCY6O43306 1168 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 EPB41L2O43491 1005 aaKnown RBP7.1□□□□□ -1.27
PTCD3-215ENST00000484203 PRC1O43663 620 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 EIF5BO60841 1220 aaKnown RBP7.1□□□□□ -1.27
PTCD3-215ENST00000484203 PPFIA4O75335 1185 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 CDC45O75419 566 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 CD4P01730 458 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 RFC2P35250 354 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 RCAN1P53805 252 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 PURAQ00577 322 aaKnown RBP7.1□□□□□ -1.27
PTCD3-215ENST00000484203 BEX3Q00994 111 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 BFSP2Q13515 415 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 SHHQ15465 462 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 CCDC62Q6P9F0 684 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 NLRP8Q86W28 1048 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 MB21D2Q8IYB1 491 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-215ENST00000484203 RETREG2Q8NC44 543 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 CCDC136Q96JN2 1154 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 CDHR1Q96JP9 859 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 LSG1Q9H089 658 aaKnown RBP7.1□□□□□ -1.27
PTCD3-215ENST00000484203 GLT8D2Q9H1C3 349 aa7.1□□□□□ -1.27
PTCD3-215ENST00000484203 IL25Q9H293 177 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms