RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TMEM39AQ9NV64 488 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PNMA2Q9UL42 364 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PCDHB6Q9Y5E3 794 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 SRPRBQ9Y5M8 271 aaKnown RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PTPRSQ13332 1948 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 FAM237AA0A1B0GTK4 181 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 SMCO2A6NFE2 343 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 GOLGA6L19H0YKK7 550 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 ATP9AO75110 1047 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 EIF3JO75822 258 aaKnown RBP7.8□□□□□ -1.16
BRCA1-216ENST00000484087 GH1P01241 217 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 ACRP10323 421 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 RAG1P15918 1043 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 ITGB5P18084 799 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 CCND2P30279 289 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 TXLNAP40222 546 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 CDK7P50613 346 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 CCL23P55773 120 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 ZNF200P98182 395 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-216ENST00000484087 HIC1Q14526 733 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 SHHQ15465 462 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 NBPF20Q3BBV1 942 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 ANO6Q4KMQ2 910 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 JAKMIP3Q5VZ66 844 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 KANK3Q6NY19 840 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 ADGRD1Q6QNK2 874 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 KRT25Q7Z3Z0 450 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 CNNM3Q8NE01 707 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 KAT2BQ92831 832 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 CUL5Q93034 780 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 SCLYQ96I15 445 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 IWS1Q96ST2 819 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 MPHOSPH6Q99547 160 aaKnown RBP7.8□□□□□ -1.16
BRCA1-216ENST00000484087 PRKAG2Q9UGJ0 569 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 TBX21Q9UL17 535 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 KCNH3Q9ULD8 1083 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 PCDHA6Q9UN73 950 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 PCDHA8Q9Y5H6 950 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 TET1Q8NFU7 2136 aa7.8□□□□□ -1.16
BRCA1-216ENST00000484087 WDR81Q562E7 1941 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 REV3LO60673 3130 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 ESYT2A0FGR8 921 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 A6NJR5 290 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 BECN2A8MW95 431 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 ARHGAP33O14559 1287 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 CD4P01730 458 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 PTMAP06454 111 aaKnown RBP7.79□□□□□ -1.16
BRCA1-216ENST00000484087 CSF2RAP15509 400 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 CAPN2P17655 700 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 ZNF165P49910 485 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 CPT1AP50416 773 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 ADCY7P51828 1080 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 TPM4P67936 248 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 NKX3-2P78367 333 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 C1orf53Q5VUE5 145 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 FAM109BQ6ICB4 259 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-216ENST00000484087 PPP1R18Q6NYC8 613 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 SHC4Q6S5L8 630 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 Q7L0L9 218 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 CYFIP1Q7L576 1253 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 ANKRD33Q7Z3H0 272 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 DHX37Q8IY37 1157 aaKnown RBP7.79□□□□□ -1.16
BRCA1-216ENST00000484087 ELOA2Q8IYF1 753 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-216ENST00000484087 CEP57L1Q8IYX8 460 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 TDHQ8IZJ6 230 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 TNFRSF25Q93038 417 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 WNT8BQ93098 351 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 ZBTB10Q96DT7 871 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 SPATA33Q96N06 139 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 INPP4AQ96PE3 977 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-216ENST00000484087 LBHD1Q9BQE6 289 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-216ENST00000484087 ANO3Q9BYT9 981 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 ZMYND12Q9H0C1 365 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 GLT8D2Q9H1C3 349 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 WNT8AQ9H1J5 351 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 KIAA1468Q9P260 1216 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 FBXO2Q9UK22 296 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-216ENST00000484087 HPSEQ9Y251 543 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 CHD9Q3L8U1 2897 aa7.79□□□□□ -1.16
BRCA1-216ENST00000484087 CHD7Q9P2D1 2997 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 PRUNE2Q8WUY3 3088 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 LOC102724159A0A0B4J2E5 919 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 SPDYE3A6NKU9 549 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 DCDC2CA8MYV0 355 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 DDX39AO00148 427 aaKnown RBP7.78□□□□□ -1.16
BRCA1-216ENST00000484087 PIK3CDO00329 1044 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 LAD1O00515 517 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 DPYSL4O14531 572 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 TRIM66O15016 1216 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 KIAA0355O15063 1070 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 ARP10275 920 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 CLK2P49760 499 aaKnown RBP7.78□□□□□ -1.16
BRCA1-216ENST00000484087 TRAF1Q13077 416 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 ORC2Q13416 577 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-216ENST00000484087 NONOQ15233 471 aaKnown RBP eCLIP7.78□□□□□ -1.16
BRCA1-216ENST00000484087 PWP2Q15269 919 aaKnown RBP7.78□□□□□ -1.16
BRCA1-216ENST00000484087 ZNF174Q15697 407 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 NPY5RQ15761 445 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 HS1BP3Q53T59 392 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 CELF3Q5SZQ8 465 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms