RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 MAFBQ9Y5Q3 323 aaPredicted RBP15.1■□□□□ 0.01
SSR1-208ENST00000483409 MBLAC1A4D2B0 266 aaPredicted RBP15.09■□□□□ 0.01
SSR1-208ENST00000483409 RRN3P2A6NIE6 340 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 H3BQV1 296 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 EML1O00423 815 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 SOX1O00570 391 aaPredicted RBP15.09■□□□□ 0.01
SSR1-208ENST00000483409 TBX3O15119 743 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 HBP1O60381 514 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 BAG4O95429 457 aaKnown RBP15.09■□□□□ 0.01
SSR1-208ENST00000483409 CTSHP09668 335 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 U2AF2P26368 475 aaKnown RBP eCLIP15.09■□□□□ 0.012e-7■■□□□ 13.1
SSR1-208ENST00000483409 RFC2P35250 354 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 PPP2R5CQ13362 524 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 TRAF7Q6Q0C0 670 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 OTOP2Q7RTS6 562 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 SLFN12Q8IYM2 578 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 RDM1Q8NG50 284 aa15.09■□□□□ 0.01
SSR1-208ENST00000483409 TNPO1Q92973 898 aaKnown RBP15.09■□□□□ 0.01
SSR1-208ENST00000483409 PTPRSQ13332 1948 aa15.08■□□□□ 0
SSR1-208ENST00000483409 K7ELQ4 463 aaPredicted RBP15.08■□□□□ 0
SSR1-208ENST00000483409 ZNF862O60290 1169 aa15.08■□□□□ 0
SSR1-208ENST00000483409 FGBP02675 491 aa15.08■□□□□ 0
SSR1-208ENST00000483409 PRKCEQ02156 737 aa15.08■□□□□ 0
SSR1-208ENST00000483409 NBR1Q14596 966 aa15.08■□□□□ 0
SSR1-208ENST00000483409 GPNMBQ14956 572 aa15.08■□□□□ 0
SSR1-208ENST00000483409 ZNF174Q15697 407 aa15.08■□□□□ 0
SSR1-208ENST00000483409 NCAPH2Q6IBW4 605 aa15.08■□□□□ 0
SSR1-208ENST00000483409 TAF2Q6P1X5 1199 aa15.08■□□□□ 0
SSR1-208ENST00000483409 BANK1Q8NDB2 785 aa15.08■□□□□ 0
SSR1-208ENST00000483409 DNAJB3Q8WWF6 145 aa15.08■□□□□ 0
SSR1-208ENST00000483409 LRCH3Q96II8 777 aa15.08■□□□□ 0
SSR1-208ENST00000483409 FTOQ9C0B1 505 aaKnown RBP eCLIP15.08■□□□□ 06e-16■□□□□ 10.2
SSR1-208ENST00000483409 FAM49AQ9H0Q0 323 aaPredicted RBP15.08■□□□□ 0
SSR1-208ENST00000483409 TMEM60Q9H2L4 133 aa15.08■□□□□ 0
SSR1-208ENST00000483409 FOXD4L1Q9NU39 408 aa15.08■□□□□ 0
SSR1-208ENST00000483409 NOL7Q9UMY1 257 aaKnown RBP15.08■□□□□ 0
SSR1-208ENST00000483409 MICAL3Q7RTP6 2002 aa15.08■□□□□ 0
SSR1-208ENST00000483409 ARID2Q68CP9 1835 aa15.08■□□□□ 0
SSR1-208ENST00000483409 RSPH10B2B2RC85 870 aa15.07■□□□□ 0
SSR1-208ENST00000483409 ZBTB42B2RXF5 422 aa15.07■□□□□ 0
SSR1-208ENST00000483409 NBNO60934 754 aa15.07■□□□□ 0
SSR1-208ENST00000483409 OATP04181 439 aa15.07■□□□□ 0
SSR1-208ENST00000483409 PFKMP08237 780 aa15.07■□□□□ 0
SSR1-208ENST00000483409 RSPH10BP0C881 870 aa15.07■□□□□ 0
SSR1-208ENST00000483409 MBTPS1Q14703 1052 aa15.07■□□□□ 0
SSR1-208ENST00000483409 LRIT3Q3SXY7 679 aa15.07■□□□□ 0
SSR1-208ENST00000483409 TTC38Q5R3I4 469 aa15.07■□□□□ 0
SSR1-208ENST00000483409 LARP1BQ659C4 914 aaKnown RBP15.07■□□□□ 0
SSR1-208ENST00000483409 BBXQ8WY36 941 aaPredicted RBP15.07■□□□□ 0
SSR1-208ENST00000483409 SNX21Q969T3 373 aa15.07■□□□□ 0
SSR1-208ENST00000483409 FAM167AQ96KS9 214 aa15.07■□□□□ 0
SSR1-208ENST00000483409 CXXC1Q9P0U4 656 aaPredicted RBP15.07■□□□□ 0
SSR1-208ENST00000483409 COL1A2P08123 1366 aa15.07■□□□□ 0
SSR1-208ENST00000483409 ZBBXA8MT70 800 aa15.06■□□□□ 0
SSR1-208ENST00000483409 CAND2O75155 1236 aa15.06■□□□□ 0
SSR1-208ENST00000483409 KLRC1P26715 233 aa15.06■□□□□ 0
SSR1-208ENST00000483409 TXKP42681 527 aa15.06■□□□□ 0
SSR1-208ENST00000483409 SPIRE1Q08AE8 756 aa15.06■□□□□ 0
SSR1-208ENST00000483409 ZNF484Q5JVG2 852 aa15.06■□□□□ 0
SSR1-208ENST00000483409 MTHFD1LQ6UB35 978 aa15.06■□□□□ 0
SSR1-208ENST00000483409 HSCBQ8IWL3 235 aa15.06■□□□□ 0
SSR1-208ENST00000483409 HERVK_113Q902F9 699 aa15.06■□□□□ 0
SSR1-208ENST00000483409 MTMR9Q96QG7 549 aa15.06■□□□□ 0
SSR1-208ENST00000483409 TTC12Q9H892 705 aaPredicted RBP15.06■□□□□ 0
SSR1-208ENST00000483409 SEPT9Q9UHD8 586 aaPredicted RBP15.06■□□□□ 0
SSR1-208ENST00000483409 PCDHA12Q9UN75 941 aa15.06■□□□□ 0
SSR1-208ENST00000483409 PCDHA2Q9Y5H9 948 aa15.06■□□□□ 0
SSR1-208ENST00000483409 SZT2Q5T011 3432 aa15.05■□□□□ -0
SSR1-208ENST00000483409 TMEM150BA6NC51 233 aa15.05■□□□□ -0
SSR1-208ENST00000483409 PARNO95453 639 aaKnown RBP15.05■□□□□ -0
SSR1-208ENST00000483409 CXCL10P02778 98 aa15.05■□□□□ -0
SSR1-208ENST00000483409 TRAPPC10P48553 1259 aa15.05■□□□□ -0
SSR1-208ENST00000483409 TOB1P50616 345 aaPredicted RBP15.05■□□□□ -0
SSR1-208ENST00000483409 TMEM62Q0P6H9 643 aa15.05■□□□□ -0
SSR1-208ENST00000483409 RSPH3Q86UC2 560 aa15.05■□□□□ -0
SSR1-208ENST00000483409 OSBPL7Q9BZF2 842 aa15.05■□□□□ -0
SSR1-208ENST00000483409 MTIF3Q9H2K0 278 aaKnown RBP15.05■□□□□ -0
SSR1-208ENST00000483409 NRBP2Q9NSY0 501 aa15.05■□□□□ -0
SSR1-208ENST00000483409 CEP131Q9UPN4 1083 aa15.05■□□□□ -0
SSR1-208ENST00000483409 VPS37CA5D8V6 355 aaPredicted RBP15.04■□□□□ -0
SSR1-208ENST00000483409 POTEMA6NI47 508 aa15.04■□□□□ -0
SSR1-208ENST00000483409 C22orf31O95567 290 aa15.04■□□□□ -0
SSR1-208ENST00000483409 CHRNA1P02708 482 aa15.04■□□□□ -0
SSR1-208ENST00000483409 OR52Z1P0C646 297 aa15.04■□□□□ -0
SSR1-208ENST00000483409 ACTN1P12814 892 aa15.04■□□□□ -0
SSR1-208ENST00000483409 PSMC5P62195 406 aa15.04■□□□□ -0
SSR1-208ENST00000483409 MRPS6P82932 125 aaKnown RBP15.04■□□□□ -0
SSR1-208ENST00000483409 CYP4A11Q02928 519 aa15.04■□□□□ -0
SSR1-208ENST00000483409 MGAT3Q09327 533 aa15.04■□□□□ -0
SSR1-208ENST00000483409 ORC2Q13416 577 aaPredicted RBP15.04■□□□□ -0
SSR1-208ENST00000483409 EPHA7Q15375 998 aa15.04■□□□□ -0
SSR1-208ENST00000483409 TCTN1Q2MV58 587 aa15.04■□□□□ -0
SSR1-208ENST00000483409 RASIP1Q5U651 963 aa15.04■□□□□ -0
SSR1-208ENST00000483409 FAM109BQ6ICB4 259 aaPredicted RBP15.04■□□□□ -0
SSR1-208ENST00000483409 RPAINQ86UA6 219 aa15.04■□□□□ -0
SSR1-208ENST00000483409 METTL13Q8N6R0 699 aa15.04■□□□□ -0
SSR1-208ENST00000483409 INTS4Q96HW7 963 aaKnown RBP15.04■□□□□ -0
SSR1-208ENST00000483409 DYDC2Q96IM9 177 aa15.04■□□□□ -0
SSR1-208ENST00000483409 LXNQ9BS40 222 aa15.04■□□□□ -0
SSR1-208ENST00000483409 RGL1Q9NZL6 768 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms