RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-229	ENST00000483159	PPP2R5C	Q13362	524 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	FAM26D	Q5JW98	314 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	OTOP2	Q7RTS6	562 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	CKAP2L	Q8IYA6	745 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	NME8	Q8N427	588 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	FAM167A	Q96KS9	214 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	UNC45A	Q9H3U1	944 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	NRBP2	Q9NSY0	501 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	GABBR1	Q9UBS5	961 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	SLC4A7	Q9Y6M7	1214 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	LAMA3	Q16787	3333 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	FAM205C	A6NFA0	338 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	NBN	O60934	754 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	EFCAB14	O75071	495 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	FOSB	P53539	338 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	IGBP1	P78318	339 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	GUCY1B3	Q02153	619 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	ORC2	Q13416	577 aa	Predicted RBP	13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	CNKSR3	Q6P9H4	555 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	MTHFD1L	Q6UB35	978 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	MIER3	Q7Z3K6	550 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	NOSTRIN	Q8IVI9	506 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	HAS1	Q92839	578 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	GJA10	Q969M2	543 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	CEP131	Q9UPN4	1083 aa		13.93	□□□□□ -0.18
MRPL55-229	ENST00000483159	IGSF9B	Q9UPX0	1349 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	LAMA2	P24043	3122 aa	Known RBP	13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	SMIM35	A0A1B0GVV1	85 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	CHMP2A	O43633	222 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	U2AF2	P26368	475 aa	Known RBP eCLIP	13.92	□□□□□ -0.18	2e-8	■□□□□ 10
MRPL55-229	ENST00000483159	KLRC1	P26715	233 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	TRAPPC10	P48553	1259 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	GNL2	Q13823	731 aa	Known RBP	13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	IKBKE	Q14164	716 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	MBTPS1	Q14703	1052 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	IER5	Q5VY09	327 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	RUFY4	Q6ZNE9	571 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	PHOSPHO2	Q8TCD6	241 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	VAV3	Q9UKW4	847 aa		13.92	□□□□□ -0.18
MRPL55-229	ENST00000483159	DOCK5	Q9H7D0	1870 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	TMEM265	A0A087WTH1	108 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	ZBTB42	B2RXF5	422 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	MAGEB2	O15479	319 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	ZNF862	O60290	1169 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	NEMF	O60524	1076 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	DKC1	O60832	514 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	SLC34A2	O95436	690 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	CHRNA1	P02708	482 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	OAT	P04181	439 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	CALCRL	Q16602	461 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	PLEKHG4	Q58EX7	1191 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	TRAPPC12	Q8WVT3	735 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	DNAJB3	Q8WWF6	145 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	MTMR9	Q96QG7	549 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	PCDHA12	Q9UN75	941 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	SMC3	Q9UQE7	1217 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	SQOR	Q9Y6N5	450 aa		13.91	□□□□□ -0.18
MRPL55-229	ENST00000483159	ZBBX	A8MT70	800 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	ATP2A2	P16615	1042 aa	Known RBP	13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	GJB2	P29033	226 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	PSMC5	P62195	406 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	SPIRE1	Q08AE8	756 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	CUL4A	Q13619	759 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	EPHA7	Q15375	998 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	XKR3	Q5GH77	459 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	ZNF710	Q8N1W2	664 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	USP38	Q8NB14	1042 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	SEPT8	Q92599	483 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	APBB2	Q92870	758 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	SLC9A7	Q96T83	725 aa		13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	NIFK	Q9BYG3	293 aa	Known RBP	13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159	NOL7	Q9UMY1	257 aa	Known RBP	13.9	□□□□□ -0.18
MRPL55-229	ENST00000483159		M0QZ92	97 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	EML1	O00423	815 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	C22orf31	O95567	290 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	P4HB	P07237	508 aa	Known RBP	13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	CTSH	P09668	335 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	QARS	P47897	775 aa	Known RBP	13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	KCNJ6	P48051	423 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	MRPS6	P82932	125 aa	Known RBP	13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	PRKCE	Q02156	737 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	MGAT3	Q09327	533 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	RAB30	Q15771	203 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	UGCG	Q16739	394 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	KIAA0319L	Q8IZA0	1049 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	DEFB123	Q8N688	67 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	DBF4B	Q8NFT6	615 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	ZBTB10	Q96DT7	871 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	TTC12	Q9H892	705 aa	Predicted RBP	13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	MSRA	Q9UJ68	235 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	KDM3A	Q9Y4C1	1321 aa		13.89	□□□□□ -0.19
MRPL55-229	ENST00000483159	WNT7A	O00755	349 aa		13.88	□□□□□ -0.19
MRPL55-229	ENST00000483159	STBD1	O95210	358 aa		13.88	□□□□□ -0.19
MRPL55-229	ENST00000483159	ATP2B1	P20020	1258 aa		13.88	□□□□□ -0.19

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