RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SMARCA1P28370 1054 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 KIF5BP33176 963 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 ANTXR2P58335 489 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 COASYQ13057 564 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 MTMR1Q13613 665 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 UBE2SQ16763 222 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 CMTR1Q8N1G2 835 aaKnown RBP8.47□□□□□ -1.05
CSDE1-206ENST00000483030 SRBD1Q8N5C6 995 aaKnown RBP8.47□□□□□ -1.05
CSDE1-206ENST00000483030 SMRP1Q8NCR6 262 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 PRSS33Q8NF86 280 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 SPDYE1Q8NFV5 336 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-206ENST00000483030 CTCFLQ8NI51 663 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-206ENST00000483030 TRAPPC12Q8WVT3 735 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 POF1BQ8WVV4 589 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 RUFY2Q8WXA3 655 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 PCYT2Q99447 389 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 FTHL17Q9BXU8 183 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 CELF4Q9BZC1 486 aaKnown RBP8.47□□□□□ -1.05
CSDE1-206ENST00000483030 TLE6Q9H808 572 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 JADE2Q9NQC1 790 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 LRFN2Q9ULH4 789 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 BARX2Q9UMQ3 279 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-206ENST00000483030 PCDHGC5Q9Y5F6 944 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 TRPV2Q9Y5S1 764 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 SQORQ9Y6N5 450 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 hCG_1642624A0A1W2PR95 340 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 LOC730098B7Z3J9 87 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 PER2O15055 1255 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 MAFGO15525 162 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 DDAH1O94760 285 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 PLEKHA8P1O95397 391 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 GLP2RO95838 553 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 RPLP2P05387 115 aaKnown RBP8.46□□□□□ -1.06
CSDE1-206ENST00000483030 GSPT1P15170 499 aaKnown RBP8.46□□□□□ -1.06
CSDE1-206ENST00000483030 CHMLP26374 656 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 GNAQP50148 359 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 ZXDAP98168 799 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 RBM10P98175 930 aaKnown RBP8.46□□□□□ -1.06
CSDE1-206ENST00000483030 NFX1Q12986 1120 aaKnown RBP8.46□□□□□ -1.06
CSDE1-206ENST00000483030 PAK2Q13177 524 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 TMEM266Q2M3C6 531 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 SPOUT1Q5T280 376 aaKnown RBP8.46□□□□□ -1.06
CSDE1-206ENST00000483030 SUGP1Q8IWZ8 645 aaKnown RBP8.46□□□□□ -1.06
CSDE1-206ENST00000483030 MB21D2Q8IYB1 491 aaPredicted RBP8.46□□□□□ -1.06
CSDE1-206ENST00000483030 CCDC82Q8N4S0 544 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 EXOC6Q8TAG9 804 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 TNPO1Q92973 898 aaKnown RBP8.46□□□□□ -1.06
CSDE1-206ENST00000483030 RPGRIP1Q96KN7 1286 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 MAP3K14Q99558 947 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 LZTS2Q9BRK4 669 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 TMX1Q9H3N1 280 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 AZI2Q9H6S1 392 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 LY9Q9HBG7 655 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 JPH1Q9HDC5 661 aaPredicted RBP8.46□□□□□ -1.06
CSDE1-206ENST00000483030 SLC9A2Q9UBY0 812 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 PCDHA6Q9UN73 950 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 TRPC6Q9Y210 931 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 USP15Q9Y4E8 981 aaPredicted RBP8.46□□□□□ -1.06
CSDE1-206ENST00000483030 PCDHB7Q9Y5E2 793 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 PCDHA8Q9Y5H6 950 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 PCDHA2Q9Y5H9 948 aa8.46□□□□□ -1.06
CSDE1-206ENST00000483030 SPDYE3A6NKU9 549 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 RXRAP19793 462 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 PDE4AP27815 886 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 STAT5BP51692 787 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 PTPN5P54829 565 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 ACTR2P61160 394 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 KRT76Q01546 638 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 CBX2Q14781 532 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-206ENST00000483030 PLCB4Q15147 1175 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 PKN1Q16512 942 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 TTC22Q5TAA0 569 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 CASC1Q6TDU7 716 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 NFXL1Q6ZNB6 911 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 NME8Q8N427 588 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 FBXL6Q8N531 539 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 CYP2W1Q8TAV3 490 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 MXRA8Q9BRK3 442 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 PHF7Q9BWX1 381 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-206ENST00000483030 KCNH7Q9NS40 1196 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 GINS2Q9Y248 185 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 PCDHB12Q9Y5F1 795 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 IGSF9BQ9UPX0 1349 aa8.45□□□□□ -1.06
CSDE1-206ENST00000483030 BAZ2BQ9UIF8 2168 aaKnown RBP8.45□□□□□ -1.06
CSDE1-206ENST00000483030 SMIM35A0A1B0GVV1 85 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 CCDC69A6NI79 296 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 TBKBP1A7MCY6 615 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 SGSM2O43147 1006 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 PRC1O43663 620 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 MGEA5O60502 916 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 FGF18O76093 207 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 ARP10275 920 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 KLRC1P26715 233 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 SARSP49591 514 aaKnown RBP8.44□□□□□ -1.06
CSDE1-206ENST00000483030 ERVFC1P60507 584 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 TCF15Q12870 199 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 FAM102BQ5T8I3 360 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 MTHFD1LQ6UB35 978 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 PLPPR4Q7Z2D5 763 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms