RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 ZNF484Q5JVG2 852 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 FAM184AQ8NB25 1140 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 FBXO18Q8NFZ0 1043 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 TMX3Q96JJ7 454 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 FAM167AQ96KS9 214 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 UIMC1Q96RL1 719 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 UNC45AQ9H3U1 944 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 KIF3AQ9Y496 699 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 SAMM50Q9Y512 469 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 PCDHA2Q9Y5H9 948 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 SLC4A7Q9Y6M7 1214 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 LAMA2P24043 3122 aaKnown RBP17.06■□□□□ 0.32
COL16A1-213ENST00000482910 ATP4AP20648 1035 aa17.05■□□□□ 0.32
COL16A1-213ENST00000482910 PPP2R5CQ13362 524 aa17.05■□□□□ 0.32
COL16A1-213ENST00000482910 PHOSPHO2Q8TCD6 241 aa17.05■□□□□ 0.32
COL16A1-213ENST00000482910 SLC9A7Q96T83 725 aa17.05■□□□□ 0.32
COL16A1-213ENST00000482910 FOXP1Q9H334 677 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-213ENST00000482910 GABBR1Q9UBS5 961 aa17.05■□□□□ 0.32
COL16A1-213ENST00000482910 CEP131Q9UPN4 1083 aa17.05■□□□□ 0.32
COL16A1-213ENST00000482910 SMIM35A0A1B0GVV1 85 aa17.04■□□□□ 0.32
COL16A1-213ENST00000482910 ABHD14A-ACY1A0A1B0GW23 586 aa17.04■□□□□ 0.32
COL16A1-213ENST00000482910 FAM205CA6NFA0 338 aa17.04■□□□□ 0.32
COL16A1-213ENST00000482910 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
COL16A1-213ENST00000482910 IGBP1P78318 339 aa17.04■□□□□ 0.32
COL16A1-213ENST00000482910 PLEKHG4Q58EX7 1191 aa17.04■□□□□ 0.32
COL16A1-213ENST00000482910 RUFY4Q6ZNE9 571 aa17.04■□□□□ 0.32
COL16A1-213ENST00000482910 MIER3Q7Z3K6 550 aa17.04■□□□□ 0.32
COL16A1-213ENST00000482910 SLFN12Q8IYM2 578 aa17.04■□□□□ 0.32
COL16A1-213ENST00000482910 ZBBXA8MT70 800 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 ZBTB42B2RXF5 422 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 CHMP2AO43633 222 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 BAG4O95429 457 aaKnown RBP17.03■□□□□ 0.32
COL16A1-213ENST00000482910 DNAJB2P25686 324 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 FOSBP53539 338 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 MGAT3Q09327 533 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 RAB30Q15771 203 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 ZNF697Q5TEC3 545 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 MTHFD1LQ6UB35 978 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 CKAP2LQ8IYA6 745 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 NME8Q8N427 588 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 DEFB123Q8N688 67 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 DNAJB3Q8WWF6 145 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 HAS1Q92839 578 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 GJA10Q969M2 543 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 VAV3Q9UKW4 847 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 SQORQ9Y6N5 450 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 MICAL3Q7RTP6 2002 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 EVPLQ92817 2033 aa17.03■□□□□ 0.32
COL16A1-213ENST00000482910 GBF1Q92538 1859 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 ZNF862O60290 1169 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 CHRNA1P02708 482 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 OATP04181 439 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 CTSHP09668 335 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 ATP2A2P16615 1042 aaKnown RBP17.02■□□□□ 0.32
COL16A1-213ENST00000482910 KLRC1P26715 233 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 GUCY1B3Q02153 619 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 ORC2Q13416 577 aaPredicted RBP17.02■□□□□ 0.32
COL16A1-213ENST00000482910 IKBKEQ14164 716 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 IER5Q5VY09 327 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 FAM43BQ6ZT52 329 aaPredicted RBP17.02■□□□□ 0.32
COL16A1-213ENST00000482910 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 TRAPPC12Q8WVT3 735 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 APBB2Q92870 758 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 PBX4Q9BYU1 374 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 NRBP2Q9NSY0 501 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 MTMR10Q9NXD2 777 aa17.02■□□□□ 0.32
COL16A1-213ENST00000482910 SIP14410 1827 aa17.02■□□□□ 0.31
COL16A1-213ENST00000482910 KDM3AQ9Y4C1 1321 aa17.01■□□□□ 0.31
COL16A1-213ENST00000482910 MAGEB2O15479 319 aa17.01■□□□□ 0.31
COL16A1-213ENST00000482910 DKC1O60832 514 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL16A1-213ENST00000482910 KCNJ6P48051 423 aa17.01■□□□□ 0.31
COL16A1-213ENST00000482910 WDR5P61964 334 aaKnown RBP17.01■□□□□ 0.31
COL16A1-213ENST00000482910 MRPS6P82932 125 aaKnown RBP17.01■□□□□ 0.31
COL16A1-213ENST00000482910 PRKCEQ02156 737 aa17.01■□□□□ 0.31
COL16A1-213ENST00000482910 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-213ENST00000482910 USP38Q8NB14 1042 aa17.01■□□□□ 0.31
COL16A1-213ENST00000482910 DBF4BQ8NFT6 615 aa17.01■□□□□ 0.31
COL16A1-213ENST00000482910 SEPT8Q92599 483 aa17.01■□□□□ 0.31
COL16A1-213ENST00000482910 TIFAQ96CG3 184 aa17.01■□□□□ 0.31
COL16A1-213ENST00000482910 MSRAQ9UJ68 235 aa17.01■□□□□ 0.31
COL16A1-213ENST00000482910 PCDHA11Q9Y5I1 949 aa17.01■□□□□ 0.31
COL16A1-213ENST00000482910 PTPRSQ13332 1948 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 GRXCR1A8MXD5 290 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 M0QZ92 97 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 MARCH6O60337 910 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 NEMFO60524 1076 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 C22orf31O95567 290 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.31
COL16A1-213ENST00000482910 TRAPPC10P48553 1259 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 PSMC5P62195 406 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 UGCGQ16739 394 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 XKR3Q5GH77 459 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 Q7L0L9 218 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 NOSTRINQ8IVI9 506 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 ZNF710Q8N1W2 664 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 NIFKQ9BYG3 293 aaKnown RBP17■□□□□ 0.31
COL16A1-213ENST00000482910 FAM49AQ9H0Q0 323 aaPredicted RBP17■□□□□ 0.31
COL16A1-213ENST00000482910 SEMA6BQ9H3T3 888 aa17■□□□□ 0.31
COL16A1-213ENST00000482910 ZSCAN21Q9Y5A6 473 aaPredicted RBP17■□□□□ 0.31
COL16A1-213ENST00000482910 TRPV2Q9Y5S1 764 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms