RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 HAS3O00219 553 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 MED24O75448 989 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 SLITRK3O94933 977 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 ATP4AP20648 1035 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 SLC26A2P50443 739 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 POTEBQ6S5H4 581 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 CATSPER3Q86XQ3 398 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 RASSF8Q8NHQ8 419 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 NEK9Q8TD19 979 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 AK8Q96MA6 479 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 HSD17B14Q9BPX1 270 aa22.31■■□□□ 1.16
TRAPPC12-220ENST00000482645 CUTAO60888 179 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 OATP04181 439 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 SMIM10L2AP0DMW4 78 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 SMIM10L2BP0DMW5 78 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 UBA7P41226 1012 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 UBE2HP62256 183 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 IGBP1P78318 339 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 AXDND1Q5T1B0 1012 aaPredicted RBP22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 POTEGQ6S5H5 508 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 SLC39A5Q6ZMH5 540 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 ZSWIM4Q9H7M6 989 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 HDAC6Q9UBN7 1215 aa22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 SEPT9Q9UHD8 586 aaPredicted RBP22.3■■□□□ 1.16
TRAPPC12-220ENST00000482645 A0A087WWV3 80 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 TMEM150BA6NC51 233 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 DKC1O60832 514 aaKnown RBP eCLIP22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 SPATA31C1P0DKV0 1188 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 PPFIA1Q13136 1202 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 UBE2Q1Q7Z7E8 422 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 CABP7Q86V35 215 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 ATP8B4Q8TF62 1192 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 EPSTI1Q96J88 318 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 PLIN2Q99541 437 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 POLR3CQ9BUI4 534 aaPredicted RBP22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 TUFT1Q9NNX1 390 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 SETD4Q9NVD3 440 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 STK24Q9Y6E0 443 aa22.29■■□□□ 1.16
TRAPPC12-220ENST00000482645 ARVCFO00192 962 aa22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 PTMSP20962 102 aa22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 RPA1P27694 616 aa22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 ECM1Q16610 540 aa22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 ADALQ6DHV7 355 aa22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 NFRKBQ6P4R8 1299 aa22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 USP49Q70CQ1 688 aa22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 SYMPKQ92797 1274 aaKnown RBP22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 CDK5RAP3Q96JB5 506 aa22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 FAM167AQ96KS9 214 aa22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 SH2D3AQ9BRG2 576 aa22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 MMTAG2Q9BU76 263 aaKnown RBP22.28■■□□□ 1.16
TRAPPC12-220ENST00000482645 PQBP1O60828 265 aaKnown RBP22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 INSRRP14616 1297 aa22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 LRRC26Q2I0M4 334 aa22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 TRIM60Q495X7 471 aa22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 PLA2G4FQ68DD2 849 aa22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 PIGOQ8TEQ8 1089 aa22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 TRAPPC12Q8WVT3 735 aa22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 BBXQ8WY36 941 aaPredicted RBP22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 NRBP2Q9NSY0 501 aa22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 DDX19AQ9NUU7 478 aaKnown RBP22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 KIAA1024Q9UPX6 916 aa22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 ATP11BQ9Y2G3 1177 aa22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 KAT6AQ92794 2004 aa22.27■■□□□ 1.16
TRAPPC12-220ENST00000482645 C17orf102A2RUQ5 167 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 ZBTB39O15060 712 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 HBP1O60381 514 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 YWHABP31946 246 aaKnown RBP22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 TXLNAP40222 546 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 GRIK4Q16099 956 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 MTERF2Q49AM1 385 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 XKR3Q5GH77 459 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 SHC4Q6S5L8 630 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 C4orf19Q8IY42 314 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 FSIP1Q8NA03 581 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 MRPS27Q92552 414 aaKnown RBP22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 CCDC43Q96MW1 224 aaKnown RBP22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 GTF2IRD1Q9UHL9 959 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 KDM3AQ9Y4C1 1321 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 A0A1W2PQ27 194 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 A0A1W2PQ64 194 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 A0A1W2PQD8 194 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 RTP1P59025 263 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 ZNF200P98182 395 aaPredicted RBP22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 KARSQ15046 597 aaKnown RBP22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 GDF6Q6KF10 455 aaPredicted RBP22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 ANO5Q75V66 913 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 LMBR1Q8WVP7 490 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 CALML4Q96GE6 196 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 GOLPH3LQ9H4A5 285 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 TRMT13Q9NUP7 481 aaKnown RBP22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 NOD1Q9Y239 953 aa22.26■■□□□ 1.15
TRAPPC12-220ENST00000482645 HIC1Q14526 733 aa22.25■■□□□ 1.15
TRAPPC12-220ENST00000482645 RESP18Q5W5W9 173 aa22.25■■□□□ 1.15
TRAPPC12-220ENST00000482645 ZNF579Q8NAF0 562 aaKnown RBP22.25■■□□□ 1.15
TRAPPC12-220ENST00000482645 SLC43A3Q8NBI5 491 aa22.25■■□□□ 1.15
TRAPPC12-220ENST00000482645 ZBTB10Q96DT7 871 aa22.25■■□□□ 1.15
TRAPPC12-220ENST00000482645 TRPV6Q9H1D0 765 aa22.25■■□□□ 1.15
TRAPPC12-220ENST00000482645 NRCAMQ92823 1304 aa22.24■■□□□ 1.15
TRAPPC12-220ENST00000482645 A0A1B0GVL5 298 aa22.24■■□□□ 1.15
TRAPPC12-220ENST00000482645 B4GALT4O60513 344 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms