RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SYCE2Q6PIF2 218 aa17.25■□□□□ 0.35
HDAC6-224ENST00000481929 THNSL1Q8IYQ7 743 aa17.25■□□□□ 0.35
HDAC6-224ENST00000481929 TMEM260Q9NX78 707 aa17.25■□□□□ 0.35
HDAC6-224ENST00000481929 ZSWIM5Q9P217 1185 aa17.25■□□□□ 0.35
HDAC6-224ENST00000481929 TRPV2Q9Y5S1 764 aa17.25■□□□□ 0.35
HDAC6-224ENST00000481929 VPS13AQ96RL7 3174 aa17.25■□□□□ 0.35
HDAC6-224ENST00000481929 EP300Q09472 2414 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-224ENST00000481929 FSCN2O14926 492 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 SARSP49591 514 aaKnown RBP17.24■□□□□ 0.35
HDAC6-224ENST00000481929 IGBP1P78318 339 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 KCNC3Q14003 757 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 PLPP4Q5VZY2 271 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 NLRX1Q86UT6 975 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 RASGRP4Q8TDF6 673 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 GLG1Q92896 1179 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 PIGSQ96S52 555 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 MAD2L2Q9UI95 211 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 PCDHB7Q9Y5E2 793 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 LAMA4Q16363 1823 aa17.24■□□□□ 0.35
HDAC6-224ENST00000481929 IGSF9BQ9UPX0 1349 aa17.23■□□□□ 0.35
HDAC6-224ENST00000481929 RRN3P2A6NIE6 340 aa17.23■□□□□ 0.35
HDAC6-224ENST00000481929 TBKBP1A7MCY6 615 aa17.23■□□□□ 0.35
HDAC6-224ENST00000481929 C2CD4DB7Z1M9 353 aa17.23■□□□□ 0.35
HDAC6-224ENST00000481929 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
HDAC6-224ENST00000481929 COLGALT1Q8NBJ5 622 aa17.23■□□□□ 0.35
HDAC6-224ENST00000481929 SEPT1Q8WYJ6 367 aa17.23■□□□□ 0.35
HDAC6-224ENST00000481929 RNF216Q9NWF9 866 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-224ENST00000481929 ZNF292O60281 2723 aa17.23■□□□□ 0.35
HDAC6-224ENST00000481929 CLCN5P51795 746 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 PDE1AP54750 535 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 TMEM62Q0P6H9 643 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 APOBRQ0VD83 1088 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 PCNX4Q63HM2 1172 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 CES5AQ6NT32 575 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 XRRA1Q6P2D8 792 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 ZBTB10Q96DT7 871 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 NECTIN4Q96NY8 510 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 TCF25Q9BQ70 676 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 KRT23Q9C075 422 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 SMARCAD1Q9H4L7 1026 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 ENTPD7Q9NQZ7 604 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 PUF60Q9UHX1 559 aaKnown RBP17.22■□□□□ 0.35
HDAC6-224ENST00000481929 LZTS1Q9Y250 596 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 MYO10Q9HD67 2058 aa17.22■□□□□ 0.35
HDAC6-224ENST00000481929 WDR87Q6ZQQ6 2873 aa17.21■□□□□ 0.35
HDAC6-224ENST00000481929 PNMA6FA0A0J9YX94 578 aa17.21■□□□□ 0.35
HDAC6-224ENST00000481929 GSTTP1A0A1W2PQM5 241 aa17.21■□□□□ 0.35
HDAC6-224ENST00000481929 PALM3A6NDB9 673 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-224ENST00000481929 MRPS27Q92552 414 aaKnown RBP17.21■□□□□ 0.35
HDAC6-224ENST00000481929 CASP10Q92851 521 aa17.21■□□□□ 0.35
HDAC6-224ENST00000481929 CELF4Q9BZC1 486 aaKnown RBP17.21■□□□□ 0.35
HDAC6-224ENST00000481929 TMX1Q9H3N1 280 aa17.21■□□□□ 0.35
HDAC6-224ENST00000481929 SMOC2Q9H3U7 446 aa17.21■□□□□ 0.35
HDAC6-224ENST00000481929 POMKQ9H5K3 350 aa17.21■□□□□ 0.35
HDAC6-224ENST00000481929 RIOX1Q9H6W3 641 aa17.21■□□□□ 0.35
HDAC6-224ENST00000481929 CNNM2Q9H8M5 875 aa17.21■□□□□ 0.35
HDAC6-224ENST00000481929 NGRNQ9NPE2 291 aaKnown RBP17.21■□□□□ 0.35
HDAC6-224ENST00000481929 NCOR2Q9Y618 2525 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 INSRRP14616 1297 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 LAG3P18627 525 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 ITIH3Q06033 890 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 SLC35G1Q2M3R5 365 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 ANKRD45Q5TZF3 282 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 FAM43BQ6ZT52 329 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-224ENST00000481929 FLCNQ8NFG4 579 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 SMARCC2Q8TAQ2 1214 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 CDHR1Q96JP9 859 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 TYW1Q9NV66 732 aaKnown RBP17.2■□□□□ 0.34
HDAC6-224ENST00000481929 HCSTQ9UBK5 93 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 CDH22Q9UJ99 828 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 FNDC1Q4ZHG4 1894 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-224ENST00000481929 EPG5Q9HCE0 2579 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 KDM3AQ9Y4C1 1321 aa17.2■□□□□ 0.34
HDAC6-224ENST00000481929 BAZ2BQ9UIF8 2168 aaKnown RBP17.19■□□□□ 0.34
HDAC6-224ENST00000481929 MED19A0JLT2 244 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-224ENST00000481929 DENND3A2RUS2 1198 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 ASGR2P07307 311 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 KCNA2P16389 499 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 PLCB3Q01970 1234 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 NFX1Q12986 1120 aaKnown RBP17.19■□□□□ 0.34
HDAC6-224ENST00000481929 IMMTQ16891 758 aaKnown RBP17.19■□□□□ 0.34
HDAC6-224ENST00000481929 TMEM266Q2M3C6 531 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 FAM102BQ5T8I3 360 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 DGLUCYQ7Z3D6 616 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 TDRD5Q8NAT2 981 aaKnown RBP17.19■□□□□ 0.34
HDAC6-224ENST00000481929 TNPO1Q92973 898 aaKnown RBP17.19■□□□□ 0.34
HDAC6-224ENST00000481929 CUL5Q93034 780 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 GPRASP2Q96D09 838 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 ADAM7Q9H2U9 754 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 C1orf112Q9NSG2 853 aa17.19■□□□□ 0.34
HDAC6-224ENST00000481929 LOXHD1Q8IVV2 1947 aa17.18■□□□□ 0.34
HDAC6-224ENST00000481929 HIDE1A8MVS5 230 aa17.18■□□□□ 0.34
HDAC6-224ENST00000481929 ATP9AO75110 1047 aa17.18■□□□□ 0.34
HDAC6-224ENST00000481929 MTHFRP42898 656 aa17.18■□□□□ 0.34
HDAC6-224ENST00000481929 KRT76Q01546 638 aa17.18■□□□□ 0.34
HDAC6-224ENST00000481929 GRM4Q14833 912 aa17.18■□□□□ 0.34
HDAC6-224ENST00000481929 SEC23AQ15436 765 aa17.18■□□□□ 0.34
HDAC6-224ENST00000481929 RMDN1Q96DB5 314 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms