RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ARRDC4Q8NCT1 418 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 MMTAG2Q9BU76 263 aaKnown RBP12.96□□□□□ -0.33
HPS4-212ENST00000481910 TSPYL1Q9H0U9 437 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 FAM13BQ9NYF5 915 aa12.96□□□□□ -0.33
HPS4-212ENST00000481910 A0A1W2PQ27 194 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 A0A1W2PQ64 194 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 A0A1W2PQD8 194 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 MED24O75448 989 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 LGALS2P05162 132 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 MYL3P08590 195 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 ZNF286BP0CG31 522 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 SPATA31C1P0DKV0 1188 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 HOXD8P13378 290 aaPredicted RBP12.96□□□□□ -0.34
HPS4-212ENST00000481910 QARSP47897 775 aaKnown RBP12.96□□□□□ -0.34
HPS4-212ENST00000481910 PSMC5P62195 406 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 KCNA10Q16322 511 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 RESP18Q5W5W9 173 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 TRIM50Q86XT4 487 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 PCSK9Q8NBP7 692 aaKnown RBP12.96□□□□□ -0.34
HPS4-212ENST00000481910 KLHDC9Q8NEP7 349 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 NEK9Q8TD19 979 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 ATP6V0A1Q93050 837 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 CALML4Q96GE6 196 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 CDK5RAP3Q96JB5 506 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 PCYT2Q99447 389 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 PLIN2Q99541 437 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 LXNQ9BS40 222 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 POLR3CQ9BUI4 534 aaPredicted RBP12.96□□□□□ -0.34
HPS4-212ENST00000481910 PANK2Q9BZ23 570 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 CCSER1Q9C0I3 900 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 SMARCAD1Q9H4L7 1026 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 TUFT1Q9NNX1 390 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 CCDC39Q9UFE4 941 aa12.96□□□□□ -0.34
HPS4-212ENST00000481910 CENPFP49454 3210 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 GADD45BO75293 160 aaPredicted RBP12.95□□□□□ -0.34
HPS4-212ENST00000481910 LGR5O75473 907 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 SGPL1O95470 568 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 GJB1P08034 283 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 CST5P28325 142 aaPredicted RBP12.95□□□□□ -0.34
HPS4-212ENST00000481910 KARSQ15046 597 aaKnown RBP12.95□□□□□ -0.34
HPS4-212ENST00000481910 LRRC41Q15345 812 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 PDXDC2PQ6P474 469 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 PLPPR4Q7Z2D5 763 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 CKAP2LQ8IYA6 745 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 U2AF1L4Q8WU68 220 aaKnown RBP12.95□□□□□ -0.34
HPS4-212ENST00000481910 C16orf70Q9BSU1 422 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
HPS4-212ENST00000481910 MAFBQ9Y5Q3 323 aaPredicted RBP12.95□□□□□ -0.34
HPS4-212ENST00000481910 EMSYQ7Z589 1322 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 KDM3AQ9Y4C1 1321 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 FRMPD3Q5JV73 1810 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 A0A1B0GVL5 298 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 POTEB3A0JP26 581 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 H3BRB1 525 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 KPNA6O60684 536 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 DKC1O60832 514 aaKnown RBP eCLIP12.94□□□□□ -0.34
HPS4-212ENST00000481910 TFRCP02786 760 aaKnown RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 ASGR1P07306 291 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 SSR1P43307 286 aaKnown RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 UBE2HP62256 183 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 PURAQ00577 322 aaKnown RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 ECM1Q16610 540 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 UGCGQ16739 394 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 POTEBQ6S5H4 581 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 PDILTQ8N807 584 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 AFAP1L1Q8TED9 768 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 MRPS27Q92552 414 aaKnown RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 NT5C3AQ9H0P0 336 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 TUT1Q9H6E5 874 aaKnown RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 ERAP1Q9NZ08 941 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 WRAP73Q9P2S5 460 aaPredicted RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 ZNF215Q9UL58 517 aaPredicted RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 KIAA1024Q9UPX6 916 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 MUTP22033 750 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 MARK3P27448 753 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 SLC26A2P50443 739 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 CHMP4BP1P59074 171 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 GRB10Q13322 594 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 COL13A1Q5TAT6 717 aaPredicted RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 CXCL17Q6UXB2 119 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 C4orf19Q8IY42 314 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 EXOC8Q8IYI6 725 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 FSIP1Q8NA03 581 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 RNF25Q96BH1 459 aaPredicted RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 LMBRD1Q9NUN5 540 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 DDX19AQ9NUU7 478 aaKnown RBP12.94□□□□□ -0.34
HPS4-212ENST00000481910 OGDHLQ9ULD0 1010 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 KCNH3Q9ULD8 1083 aa12.94□□□□□ -0.34
HPS4-212ENST00000481910 IGSF9BQ9UPX0 1349 aa12.93□□□□□ -0.34
HPS4-212ENST00000481910 A0A087WWV3 80 aa12.93□□□□□ -0.34
HPS4-212ENST00000481910 KBTBD13C9JR72 458 aa12.93□□□□□ -0.34
HPS4-212ENST00000481910 SLC26A4O43511 780 aa12.93□□□□□ -0.34
HPS4-212ENST00000481910 ZNF862O60290 1169 aa12.93□□□□□ -0.34
HPS4-212ENST00000481910 PFKFB1P16118 471 aa12.93□□□□□ -0.34
HPS4-212ENST00000481910 ZSCAN20P17040 1043 aaPredicted RBP12.93□□□□□ -0.34
HPS4-212ENST00000481910 MCM4P33991 863 aa12.93□□□□□ -0.34
HPS4-212ENST00000481910 HYIQ5T013 277 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms