RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 CYP2C8P10632 490 aa11.79□□□□□ -0.52
CUL3-209ENST00000481135 FBLN1P23142 703 aa11.79□□□□□ -0.52
CUL3-209ENST00000481135 TRIM8Q9BZR9 551 aa11.79□□□□□ -0.52
CUL3-209ENST00000481135 KDM1AO60341 852 aa11.78□□□□□ -0.52
CUL3-209ENST00000481135 ALDH1L1O75891 902 aa11.78□□□□□ -0.52
CUL3-209ENST00000481135 PTGS1P23219 599 aa11.78□□□□□ -0.52
CUL3-209ENST00000481135 TTC38Q5R3I4 469 aa11.78□□□□□ -0.52
CUL3-209ENST00000481135 FBXO15Q8NCQ5 510 aaPredicted RBP11.78□□□□□ -0.52
CUL3-209ENST00000481135 CALML6Q8TD86 181 aa11.78□□□□□ -0.52
CUL3-209ENST00000481135 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
CUL3-209ENST00000481135 TMEM209Q96SK2 561 aa11.78□□□□□ -0.52
CUL3-209ENST00000481135 SMAD5Q99717 465 aaKnown RBP11.78□□□□□ -0.52
CUL3-209ENST00000481135 MCOLN1Q9GZU1 580 aa11.78□□□□□ -0.52
CUL3-209ENST00000481135 CCDC8Q9H0W5 538 aaPredicted RBP11.78□□□□□ -0.52
CUL3-209ENST00000481135 CNTD2Q9H8S5 307 aa11.78□□□□□ -0.52
CUL3-209ENST00000481135 MBD1Q9UIS9 605 aaPredicted RBP11.78□□□□□ -0.52
CUL3-209ENST00000481135 MSRAQ9UJ68 235 aa11.78□□□□□ -0.52
CUL3-209ENST00000481135 PRAMEF22A3QJZ6 481 aa11.77□□□□□ -0.53
CUL3-209ENST00000481135 FBXO21O94952 628 aa11.77□□□□□ -0.53
CUL3-209ENST00000481135 TAL1P17542 331 aaPredicted RBP11.77□□□□□ -0.53
CUL3-209ENST00000481135 KLF1Q13351 362 aaPredicted RBP11.77□□□□□ -0.53
CUL3-209ENST00000481135 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.53
CUL3-209ENST00000481135 IGDCC4Q8TDY8 1250 aa11.77□□□□□ -0.53
CUL3-209ENST00000481135 MZB1Q8WU39 189 aa11.77□□□□□ -0.53
CUL3-209ENST00000481135 TUBGCP5Q96RT8 1024 aa11.77□□□□□ -0.53
CUL3-209ENST00000481135 C14orf119Q9NWQ9 140 aa11.77□□□□□ -0.53
CUL3-209ENST00000481135 BTBD7Q9P203 1132 aa11.77□□□□□ -0.53
CUL3-209ENST00000481135 PCDHA5Q9Y5H7 936 aa11.77□□□□□ -0.53
CUL3-209ENST00000481135 MYOCOSA0A1B0GUC4 107 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 ESPNLQ6ZVH7 1005 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 B3GNT8Q7Z7M8 397 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 CILP2Q8IUL8 1156 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 FAM26EQ8N5C1 309 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 WDR48Q8TAF3 677 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 JDP2Q8WYK2 163 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 ACAP3Q96P50 834 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 VTA1Q9NP79 307 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 INCENPQ9NQS7 918 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 TOPORSQ9NS56 1045 aaPredicted RBP11.76□□□□□ -0.53
CUL3-209ENST00000481135 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.76□□□□□ -0.53
CUL3-209ENST00000481135 KLHL42Q9P2K6 505 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 PLA2G2DQ9UNK4 145 aa11.76□□□□□ -0.53
CUL3-209ENST00000481135 GOLGA8AA7E2F4 631 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 ZNF839A8K0R7 811 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 GOLGA8BA8MQT2 603 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 C8BP07358 591 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 CDR1P51861 262 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 EPHB1P54762 984 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 ERVK-21P61565 698 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 PFKPQ01813 784 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 ROM1Q03395 351 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 RTN4RL1Q86UN2 441 aaPredicted RBP11.75□□□□□ -0.53
CUL3-209ENST00000481135 FOXB1Q99853 325 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 SLC39A2Q9NP94 309 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 DLL4Q9NR61 685 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 UCKL1Q9NWZ5 548 aa11.75□□□□□ -0.53
CUL3-209ENST00000481135 GABRDO14764 452 aa11.74□□□□□ -0.53
CUL3-209ENST00000481135 N4BP3O15049 544 aa11.74□□□□□ -0.53
CUL3-209ENST00000481135 CFBP00751 764 aa11.74□□□□□ -0.53
CUL3-209ENST00000481135 NCKAP1LP55160 1127 aa11.74□□□□□ -0.53
CUL3-209ENST00000481135 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
CUL3-209ENST00000481135 TMC5Q6UXY8 1006 aa11.74□□□□□ -0.53
CUL3-209ENST00000481135 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
CUL3-209ENST00000481135 FOXRED1Q96CU9 486 aaPredicted RBP11.74□□□□□ -0.53
CUL3-209ENST00000481135 MAML3Q96JK9 1138 aa11.74□□□□□ -0.53
CUL3-209ENST00000481135 WRNIP1Q96S55 665 aa11.74□□□□□ -0.53
CUL3-209ENST00000481135 TCEAL9Q9UHQ7 104 aa11.74□□□□□ -0.53
CUL3-209ENST00000481135 G3BP2Q9UN86 482 aaKnown RBP11.74□□□□□ -0.53
CUL3-209ENST00000481135 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.74□□□□□ -0.53
CUL3-209ENST00000481135 SHTN1A0MZ66 631 aa11.73□□□□□ -0.53
CUL3-209ENST00000481135 TMEM253P0C7T8 217 aa11.73□□□□□ -0.53
CUL3-209ENST00000481135 NEK2P51955 445 aa11.73□□□□□ -0.53
CUL3-209ENST00000481135 SCAND1P57086 179 aa11.73□□□□□ -0.53
CUL3-209ENST00000481135 ALDH6A1Q02252 535 aaKnown RBP11.73□□□□□ -0.53
CUL3-209ENST00000481135 PROSER1Q86XN7 944 aa11.73□□□□□ -0.53
CUL3-209ENST00000481135 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
CUL3-209ENST00000481135 GALNT8Q9NY28 637 aa11.73□□□□□ -0.53
CUL3-209ENST00000481135 MAFGO15525 162 aa11.72□□□□□ -0.53
CUL3-209ENST00000481135 ATF2P15336 505 aa11.72□□□□□ -0.53
CUL3-209ENST00000481135 MC3RP41968 323 aa11.72□□□□□ -0.53
CUL3-209ENST00000481135 SLC6A3Q01959 620 aa11.72□□□□□ -0.53
CUL3-209ENST00000481135 ZBTB46Q86UZ6 589 aa11.72□□□□□ -0.53
CUL3-209ENST00000481135 AMOTL1Q8IY63 956 aa11.72□□□□□ -0.53
CUL3-209ENST00000481135 KCNN1Q92952 543 aa11.72□□□□□ -0.53
CUL3-209ENST00000481135 FERMT2Q96AC1 680 aa11.72□□□□□ -0.53
CUL3-209ENST00000481135 CHMP4CQ96CF2 233 aa11.72□□□□□ -0.53
CUL3-209ENST00000481135 MS4A5Q9H3V2 200 aa11.72□□□□□ -0.53
CUL3-209ENST00000481135 PRLP01236 227 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 MYBL2P10244 700 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 MC4RP32245 332 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 SKIDA1Q1XH10 827 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 PRAMEF9Q5VWM5 478 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 SLFN12LQ6IEE8 588 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 DPP8Q6V1X1 898 aaPredicted RBP11.71□□□□□ -0.53
CUL3-209ENST00000481135 LIPIQ6XZB0 460 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 DTX3Q8N9I9 347 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 LMBR1Q8WVP7 490 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 CLIC6Q96NY7 704 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 WNT8AQ9H1J5 351 aa11.71□□□□□ -0.53
CUL3-209ENST00000481135 ARHGAP20Q9P2F6 1191 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms