RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 RUFY4Q6ZNE9 571 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 TDHQ8IZJ6 230 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 RETREG2Q8NC44 543 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 BANK1Q8NDB2 785 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 RDM1Q8NG50 284 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 MTMR9Q96QG7 549 aa13.59□□□□□ -0.23
CCM2-212ENST00000480382 EVPLQ92817 2033 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 MBLAC1A4D2B0 266 aaPredicted RBP13.58□□□□□ -0.24
CCM2-212ENST00000480382 HBP1O60381 514 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 OATP04181 439 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 OR52Z1P0C646 297 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 IQCF3P0C7M6 154 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 ACRP10323 421 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 PDCP20941 246 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 THPOP40225 353 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 TXKP42681 527 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 ORC2Q13416 577 aaPredicted RBP13.58□□□□□ -0.24
CCM2-212ENST00000480382 C9orf50Q5SZB4 431 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 LRRC8DQ7L1W4 858 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 BBXQ8WY36 941 aaPredicted RBP13.58□□□□□ -0.24
CCM2-212ENST00000480382 TNPO1Q92973 898 aaKnown RBP13.58□□□□□ -0.24
CCM2-212ENST00000480382 TTC12Q9H892 705 aaPredicted RBP13.58□□□□□ -0.24
CCM2-212ENST00000480382 PCDHB6Q9Y5E3 794 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 TET1Q8NFU7 2136 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 LOXHD1Q8IVV2 1947 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 COL1A2P08123 1366 aa13.58□□□□□ -0.24
CCM2-212ENST00000480382 POTEMA6NI47 508 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 RRN3P2A6NIE6 340 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 ZBTB42B2RXF5 422 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 CTSHP09668 335 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 SELPP16109 830 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 SYT1P21579 422 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 SHHQ15465 462 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 HABP4Q5JVS0 413 aaKnown RBP13.57□□□□□ -0.24
CCM2-212ENST00000480382 ZNF618Q5T7W0 954 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 TRAF7Q6Q0C0 670 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 C16orf59Q7L2K0 433 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 DEFB128Q7Z7B8 93 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 FERMT3Q86UX7 667 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 FAM167AQ96KS9 214 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCM2-212ENST00000480382 IL23AQ9NPF7 189 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 PCDHA12Q9UN75 941 aa13.57□□□□□ -0.24
CCM2-212ENST00000480382 A0A1W2PPC1 479 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 TMEM150BA6NC51 233 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 HSP90AA1P07900 732 aaKnown RBP13.56□□□□□ -0.24
CCM2-212ENST00000480382 RFC2P35250 354 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 PSMC5P62195 406 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 EPHA7Q15375 998 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 RILPL1Q5EBL4 403 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 ZNF484Q5JVG2 852 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 TAF2Q6P1X5 1199 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 PSRC1Q6PGN9 363 aaPredicted RBP13.56□□□□□ -0.24
CCM2-212ENST00000480382 MTHFD1LQ6UB35 978 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 VWCEQ96DN2 955 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 DYDC2Q96IM9 177 aa13.56□□□□□ -0.24
CCM2-212ENST00000480382 WRAP73Q9P2S5 460 aaPredicted RBP13.56□□□□□ -0.24
CCM2-212ENST00000480382 SEPT9Q9UHD8 586 aaPredicted RBP13.56□□□□□ -0.24
CCM2-212ENST00000480382 GBF1Q92538 1859 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 PTPRSQ13332 1948 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 CAND2O75155 1236 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 C22orf31O95567 290 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 P4HBP07237 508 aaKnown RBP13.55□□□□□ -0.24
CCM2-212ENST00000480382 KLRC1P26715 233 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 QARSP47897 775 aaKnown RBP13.55□□□□□ -0.24
CCM2-212ENST00000480382 CYP4A11Q02928 519 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 PTGDRQ13258 359 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 MBTPS1Q14703 1052 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 GPNMBQ14956 572 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 TMEM240Q5SV17 173 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 C4orf32Q8N8J7 132 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 DNAJB3Q8WWF6 145 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 RNPC3Q96LT9 517 aaKnown RBP13.55□□□□□ -0.24
CCM2-212ENST00000480382 EIF2AK1Q9BQI3 630 aaKnown RBP13.55□□□□□ -0.24
CCM2-212ENST00000480382 SH2D3AQ9BRG2 576 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 LXNQ9BS40 222 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 FAM49AQ9H0Q0 323 aaPredicted RBP13.55□□□□□ -0.24
CCM2-212ENST00000480382 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.55□□□□□ -0.24
CCM2-212ENST00000480382 RGL1Q9NZL6 768 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 CEP131Q9UPN4 1083 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 PCDHA2Q9Y5H9 948 aa13.55□□□□□ -0.24
CCM2-212ENST00000480382 MICAL3Q7RTP6 2002 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 RSPH10B2B2RC85 870 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 NBNO60934 754 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 STBD1O95210 358 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 PFKMP08237 780 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 RSPH10BP0C881 870 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 TECP42680 631 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 MGAT3Q09327 533 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 RESTQ13127 1097 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 CTTNQ14247 550 aaKnown RBP13.54□□□□□ -0.24
CCM2-212ENST00000480382 MTERF2Q49AM1 385 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 XKR3Q5GH77 459 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 PLA2G4FQ68DD2 849 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 BRAPQ7Z569 592 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 RSPH3Q86UC2 560 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 RPUSD2Q8IZ73 545 aaKnown RBP13.54□□□□□ -0.24
CCM2-212ENST00000480382 FTOQ9C0B1 505 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms