RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 MICAL1Q8TDZ2 1067 aa17.88■□□□□ 0.45
HDLBP-238ENST00000479894 LINC01599Q8WXQ3 324 aa17.88■□□□□ 0.45
HDLBP-238ENST00000479894 GPKOWQ92917 476 aaPredicted RBP eCLIP17.88■□□□□ 0.45
HDLBP-238ENST00000479894 JMJD4Q9H9V9 463 aa17.88■□□□□ 0.45
HDLBP-238ENST00000479894 PCDHGC5Q9Y5F6 944 aa17.88■□□□□ 0.45
HDLBP-238ENST00000479894 KMT2BQ9UMN6 2715 aaPredicted RBP17.87■□□□□ 0.45
HDLBP-238ENST00000479894 ERICH2A1L162 156 aa17.87■□□□□ 0.45
HDLBP-238ENST00000479894 STAM2O75886 525 aa17.87■□□□□ 0.45
HDLBP-238ENST00000479894 BRD1O95696 1058 aa17.87■□□□□ 0.45
HDLBP-238ENST00000479894 HOXB8P17481 243 aaPredicted RBP17.87■□□□□ 0.45
HDLBP-238ENST00000479894 ANKRD54Q6NXT1 300 aa17.87■□□□□ 0.45
HDLBP-238ENST00000479894 KCNB2Q92953 911 aa17.87■□□□□ 0.45
HDLBP-238ENST00000479894 UBAC1Q9BSL1 405 aa17.87■□□□□ 0.45
HDLBP-238ENST00000479894 AAASQ9NRG9 546 aa17.87■□□□□ 0.45
HDLBP-238ENST00000479894 PCDHB12Q9Y5F1 795 aa17.87■□□□□ 0.45
HDLBP-238ENST00000479894 DNAH14Q0VDD8 3507 aa17.86■□□□□ 0.45
HDLBP-238ENST00000479894 LAMA4Q16363 1823 aa17.86■□□□□ 0.45
HDLBP-238ENST00000479894 E7EWF7 191 aa17.86■□□□□ 0.45
HDLBP-238ENST00000479894 DHX16O60231 1041 aaKnown RBP17.86■□□□□ 0.45
HDLBP-238ENST00000479894 RUFY4Q6ZNE9 571 aa17.86■□□□□ 0.45
HDLBP-238ENST00000479894 RTN4RL1Q86UN2 441 aaPredicted RBP17.86■□□□□ 0.45
HDLBP-238ENST00000479894 TRIM50Q86XT4 487 aa17.86■□□□□ 0.45
HDLBP-238ENST00000479894 TBC1D10CQ8IV04 446 aa17.86■□□□□ 0.45
HDLBP-238ENST00000479894 BCAS3Q9H6U6 928 aa17.86■□□□□ 0.45
HDLBP-238ENST00000479894 KAT14Q9H8E8 782 aa17.86■□□□□ 0.45
HDLBP-238ENST00000479894 CDY2AQ9Y6F7 541 aa17.86■□□□□ 0.45
HDLBP-238ENST00000479894 CEP250Q9BV73 2442 aa17.86■□□□□ 0.45
HDLBP-238ENST00000479894 MED19A0JLT2 244 aaPredicted RBP17.85■□□□□ 0.45
HDLBP-238ENST00000479894 FSCN2O14926 492 aa17.85■□□□□ 0.45
HDLBP-238ENST00000479894 MCM5P33992 734 aa17.85■□□□□ 0.45
HDLBP-238ENST00000479894 TECP42680 631 aa17.85■□□□□ 0.45
HDLBP-238ENST00000479894 RBM10P98175 930 aaKnown RBP17.85■□□□□ 0.45
HDLBP-238ENST00000479894 PAN2Q504Q3 1202 aaKnown RBP17.85■□□□□ 0.45
HDLBP-238ENST00000479894 SYCE2Q6PIF2 218 aa17.85■□□□□ 0.45
HDLBP-238ENST00000479894 CYFIP1Q7L576 1253 aa17.85■□□□□ 0.45
HDLBP-238ENST00000479894 TMTC2Q8N394 836 aa17.85■□□□□ 0.45
HDLBP-238ENST00000479894 NECTIN4Q96NY8 510 aa17.85■□□□□ 0.45
HDLBP-238ENST00000479894 INPP4AQ96PE3 977 aaPredicted RBP17.85■□□□□ 0.45
HDLBP-238ENST00000479894 BACH2Q9BYV9 841 aa17.85■□□□□ 0.45
HDLBP-238ENST00000479894 SEMA4AQ9H3S1 761 aa17.85■□□□□ 0.45
HDLBP-238ENST00000479894 AGO3Q9H9G7 860 aaKnown RBP17.85■□□□□ 0.45
HDLBP-238ENST00000479894 BAZ2BQ9UIF8 2168 aaKnown RBP17.85■□□□□ 0.45
HDLBP-238ENST00000479894 NCOR2Q9Y618 2525 aa17.85■□□□□ 0.45
HDLBP-238ENST00000479894 FANCMQ8IYD8 2048 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 MBLAC1A4D2B0 266 aaPredicted RBP17.84■□□□□ 0.45
HDLBP-238ENST00000479894 SPATA31C2B4DYI2 1134 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 PARP1P09874 1014 aaKnown RBP17.84■□□□□ 0.45
HDLBP-238ENST00000479894 SCG2P13521 617 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 CD52P31358 61 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 TRAF1Q13077 416 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 DGLUCYQ7Z3D6 616 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 MTMR8Q96EF0 704 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 SENP7Q9BQF6 1050 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 TM6SF1Q9BZW5 370 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 VAT1LQ9HCJ6 419 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 TUBE1Q9UJT0 475 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 LZTS1Q9Y250 596 aa17.84■□□□□ 0.45
HDLBP-238ENST00000479894 FRMPD4Q14CM0 1322 aa17.83■□□□□ 0.44
HDLBP-238ENST00000479894 FIBPO43427 364 aa17.83■□□□□ 0.44
HDLBP-238ENST00000479894 PPFIA3O75145 1194 aa17.83■□□□□ 0.44
HDLBP-238ENST00000479894 HOXA13P31271 388 aaPredicted RBP17.83■□□□□ 0.44
HDLBP-238ENST00000479894 ERVFC1P60507 584 aa17.83■□□□□ 0.44
HDLBP-238ENST00000479894 MRPS6P82932 125 aaKnown RBP17.83■□□□□ 0.44
HDLBP-238ENST00000479894 UTP14CQ5TAP6 766 aaKnown RBP17.83■□□□□ 0.44
HDLBP-238ENST00000479894 IER5Q5VY09 327 aa17.83■□□□□ 0.44
HDLBP-238ENST00000479894 DNAJB3Q8WWF6 145 aa17.83■□□□□ 0.44
HDLBP-238ENST00000479894 RMDN1Q96DB5 314 aa17.83■□□□□ 0.44
HDLBP-238ENST00000479894 ZKSCAN3Q9BRR0 538 aa17.83■□□□□ 0.44
HDLBP-238ENST00000479894 MFSD1Q9H3U5 465 aa17.83■□□□□ 0.44
HDLBP-238ENST00000479894 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
HDLBP-238ENST00000479894 PCDHA1Q9Y5I3 950 aa17.83■□□□□ 0.44
HDLBP-238ENST00000479894 B4E1Z4 1266 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 GCOM1H8Y6P7 765 aaPredicted RBP17.82■□□□□ 0.44
HDLBP-238ENST00000479894 ZBTB5O15062 677 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 FGF18O76093 207 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 POLR2MP0CAP2 368 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 MRPS9P82933 396 aaKnown RBP17.82■□□□□ 0.44
HDLBP-238ENST00000479894 PPFIA1Q13136 1202 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 SEMA3FQ13275 785 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 TPRNQ4KMQ1 711 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 BLOC1S2Q6QNY1 142 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
HDLBP-238ENST00000479894 ZFP91Q96JP5 570 aaPredicted RBP17.82■□□□□ 0.44
HDLBP-238ENST00000479894 TMEM87BQ96K49 555 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 C22orf23Q9BZE7 217 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 ZSWIM5Q9P217 1185 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 LRFN2Q9ULH4 789 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 SNX14Q9Y5W7 946 aa17.82■□□□□ 0.44
HDLBP-238ENST00000479894 OTOGLQ3ZCN5 2332 aa17.81■□□□□ 0.44
HDLBP-238ENST00000479894 NEDD4P46934 1319 aa17.81■□□□□ 0.44
HDLBP-238ENST00000479894 C2CD4DB7Z1M9 353 aa17.81■□□□□ 0.44
HDLBP-238ENST00000479894 PPP1R11O60927 126 aaPredicted RBP17.81■□□□□ 0.44
HDLBP-238ENST00000479894 SP100P23497 879 aaPredicted RBP17.81■□□□□ 0.44
HDLBP-238ENST00000479894 FGD1P98174 961 aa17.81■□□□□ 0.44
HDLBP-238ENST00000479894 ITIH3Q06033 890 aa17.81■□□□□ 0.44
HDLBP-238ENST00000479894 PUM1Q14671 1186 aaKnown RBP eCLIP17.81■□□□□ 0.44
HDLBP-238ENST00000479894 GRIK4Q16099 956 aa17.81■□□□□ 0.44
HDLBP-238ENST00000479894 SPOUT1Q5T280 376 aaKnown RBP17.81■□□□□ 0.44
HDLBP-238ENST00000479894 CES5AQ6NT32 575 aa17.81■□□□□ 0.44
HDLBP-238ENST00000479894 ZDHHC14Q8IZN3 488 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms