RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 TIMP1P01033 207 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 IGBP1P78318 339 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 ADAM17P78536 824 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 PDIA5Q14554 519 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 SF3A1Q15459 793 aaKnown RBP28.06■■■□□ 2.08
PERM1-203ENST00000479361 XKR3Q5GH77 459 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 FOXD4L5Q5VV16 416 aaPredicted RBP28.06■■■□□ 2.08
PERM1-203ENST00000479361 TRMT1LQ7Z2T5 733 aaKnown RBP28.06■■■□□ 2.08
PERM1-203ENST00000479361 SERINC5Q86VE9 423 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 CAGE1Q8TC20 777 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 FOXD4L4Q8WXT5 416 aaPredicted RBP28.06■■■□□ 2.08
PERM1-203ENST00000479361 CTAGE1Q96RT6 745 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 NOC4LQ9BVI4 516 aaKnown RBP28.06■■■□□ 2.08
PERM1-203ENST00000479361 ZSWIM4Q9H7M6 989 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 TUBE1Q9UJT0 475 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 STK24Q9Y6E0 443 aa28.06■■■□□ 2.08
PERM1-203ENST00000479361 MYH9P35579 1960 aaKnown RBP28.05■■■□□ 2.08
PERM1-203ENST00000479361 PKP1Q13835 747 aa28.05■■■□□ 2.08
PERM1-203ENST00000479361 FAM173BQ6P4H8 233 aa28.05■■■□□ 2.08
PERM1-203ENST00000479361 DYDC2Q96IM9 177 aa28.05■■■□□ 2.08
PERM1-203ENST00000479361 LXNQ9BS40 222 aa28.05■■■□□ 2.08
PERM1-203ENST00000479361 RGL1Q9NZL6 768 aa28.05■■■□□ 2.08
PERM1-203ENST00000479361 MBLAC1A4D2B0 266 aaPredicted RBP28.04■■■□□ 2.08
PERM1-203ENST00000479361 PITPNM1O00562 1244 aa28.04■■■□□ 2.08
PERM1-203ENST00000479361 CYP4A11Q02928 519 aa28.04■■■□□ 2.08
PERM1-203ENST00000479361 TAF2Q6P1X5 1199 aa28.04■■■□□ 2.08
PERM1-203ENST00000479361 C4orf19Q8IY42 314 aa28.04■■■□□ 2.08
PERM1-203ENST00000479361 ZNF396Q96N95 335 aaPredicted RBP28.04■■■□□ 2.08
PERM1-203ENST00000479361 HSD17B14Q9BPX1 270 aa28.04■■■□□ 2.08
PERM1-203ENST00000479361 PPP1R12CQ9BZL4 782 aa28.04■■■□□ 2.08
PERM1-203ENST00000479361 LRWD1Q9UFC0 647 aa28.04■■■□□ 2.08
PERM1-203ENST00000479361 SLITRK3O94933 977 aa28.03■■■□□ 2.08
PERM1-203ENST00000479361 MARCH8Q5T0T0 291 aa28.03■■■□□ 2.08
PERM1-203ENST00000479361 HAUS3Q68CZ6 603 aa28.03■■■□□ 2.08
PERM1-203ENST00000479361 TPH2Q8IWU9 490 aa28.03■■■□□ 2.08
PERM1-203ENST00000479361 IGSF22Q8N9C0 903 aa28.03■■■□□ 2.08
PERM1-203ENST00000479361 RETREG2Q8NC44 543 aa28.03■■■□□ 2.08
PERM1-203ENST00000479361 SEPT9Q9UHD8 586 aaPredicted RBP28.03■■■□□ 2.08
PERM1-203ENST00000479361 CLIC4Q9Y696 253 aa28.03■■■□□ 2.08
PERM1-203ENST00000479361 DDX11L8A8MPP1 907 aa28.02■■■□□ 2.08
PERM1-203ENST00000479361 RPLP2P05387 115 aaKnown RBP28.02■■■□□ 2.08
PERM1-203ENST00000479361 RBL2Q08999 1139 aa28.02■■■□□ 2.08
PERM1-203ENST00000479361 CTTNQ14247 550 aaKnown RBP28.02■■■□□ 2.08
PERM1-203ENST00000479361 NIFKQ9BYG3 293 aaKnown RBP28.02■■■□□ 2.08
PERM1-203ENST00000479361 TUFT1Q9NNX1 390 aa28.02■■■□□ 2.08
PERM1-203ENST00000479361 KAT6AQ92794 2004 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 ZBTB42B2RXF5 422 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 CAND2O75155 1236 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 BRD1O95696 1058 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 ITGB8P26012 769 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 CYP2C18P33260 490 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 PRPF38BQ5VTL8 546 aaKnown RBP28.01■■■□□ 2.07
PERM1-203ENST00000479361 MFSD5Q6N075 450 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 OTUD6AQ7L8S5 288 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 TMEM199Q8N511 208 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 TRAPPC12Q8WVT3 735 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 DHX38Q92620 1227 aaKnown RBP28.01■■■□□ 2.07
PERM1-203ENST00000479361 BADQ92934 168 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 POLR3CQ9BUI4 534 aaPredicted RBP28.01■■■□□ 2.07
PERM1-203ENST00000479361 PCDHA2Q9Y5H9 948 aa28.01■■■□□ 2.07
PERM1-203ENST00000479361 VWA3AA6NCI4 1184 aa28■■■□□ 2.07
PERM1-203ENST00000479361 STBD1O95210 358 aa28■■■□□ 2.07
PERM1-203ENST00000479361 LYPLA2O95372 231 aa28■■■□□ 2.07
PERM1-203ENST00000479361 KLRC1P26715 233 aa28■■■□□ 2.07
PERM1-203ENST00000479361 RPA1P27694 616 aa28■■■□□ 2.07
PERM1-203ENST00000479361 IL17AQ16552 155 aa28■■■□□ 2.07
PERM1-203ENST00000479361 MTHFD1LQ6UB35 978 aa28■■■□□ 2.07
PERM1-203ENST00000479361 RSPH3Q86UC2 560 aa28■■■□□ 2.07
PERM1-203ENST00000479361 USP28Q96RU2 1077 aa28■■■□□ 2.07
PERM1-203ENST00000479361 FTOQ9C0B1 505 aaKnown RBP eCLIP28■■■□□ 2.07
PERM1-203ENST00000479361 WRAP73Q9P2S5 460 aaPredicted RBP28■■■□□ 2.07
PERM1-203ENST00000479361 WDR81Q562E7 1941 aa28■■■□□ 2.07
PERM1-203ENST00000479361 MAGEB2O15479 319 aa27.99■■■□□ 2.07
PERM1-203ENST00000479361 CKBP12277 381 aa27.99■■■□□ 2.07
PERM1-203ENST00000479361 YWHABP31946 246 aaKnown RBP27.99■■■□□ 2.07
PERM1-203ENST00000479361 THPOP40225 353 aa27.99■■■□□ 2.07
PERM1-203ENST00000479361 MAGEA10P43363 369 aaPredicted RBP27.99■■■□□ 2.07
PERM1-203ENST00000479361 MDM2Q00987 491 aaPredicted RBP27.99■■■□□ 2.07
PERM1-203ENST00000479361 CEBPZQ03701 1054 aaKnown RBP27.99■■■□□ 2.07
PERM1-203ENST00000479361 KRT79Q5XKE5 535 aa27.99■■■□□ 2.07
PERM1-203ENST00000479361 ATL3Q6DD88 541 aa27.99■■■□□ 2.07
PERM1-203ENST00000479361 ANO5Q75V66 913 aa27.99■■■□□ 2.07
PERM1-203ENST00000479361 RPAINQ86UA6 219 aa27.99■■■□□ 2.07
PERM1-203ENST00000479361 AK8Q96MA6 479 aa27.99■■■□□ 2.07
PERM1-203ENST00000479361 PPME1Q9Y570 386 aa27.99■■■□□ 2.07
PERM1-203ENST00000479361 UMODL1Q5DID0 1318 aa27.98■■■□□ 2.07
PERM1-203ENST00000479361 SELPP16109 830 aa27.98■■■□□ 2.07
PERM1-203ENST00000479361 MUTP22033 750 aa27.98■■■□□ 2.07
PERM1-203ENST00000479361 PTPAQ15257 358 aa27.98■■■□□ 2.07
PERM1-203ENST00000479361 TRIM71Q2Q1W2 868 aaKnown RBP27.98■■■□□ 2.07
PERM1-203ENST00000479361 CATSPER3Q86XQ3 398 aa27.98■■■□□ 2.07
PERM1-203ENST00000479361 WNT8BQ93098 351 aa27.98■■■□□ 2.07
PERM1-203ENST00000479361 ATP6V1DQ9Y5K8 247 aa27.98■■■□□ 2.07
PERM1-203ENST00000479361 MORC2Q9Y6X9 1032 aaPredicted RBP27.98■■■□□ 2.07
PERM1-203ENST00000479361 CEP290O15078 2479 aa27.98■■■□□ 2.07
PERM1-203ENST00000479361 SMIM35A0A1B0GVV1 85 aa27.97■■■□□ 2.07
PERM1-203ENST00000479361 PARNO95453 639 aaKnown RBP27.97■■■□□ 2.07
PERM1-203ENST00000479361 C22orf31O95567 290 aa27.97■■■□□ 2.07
PERM1-203ENST00000479361 SPATA31C1P0DKV0 1188 aa27.97■■■□□ 2.07
PERM1-203ENST00000479361 CCT6AP40227 531 aaKnown RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms