RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 ZNF200P98182 395 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-211ENST00000479100 ATP2C1P98194 919 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-211ENST00000479100 SPIRE1Q08AE8 756 aa17.08■□□□□ 0.32
COL16A1-211ENST00000479100 PTGISQ16647 500 aa17.08■□□□□ 0.32
COL16A1-211ENST00000479100 DTHD1Q6ZMT9 781 aa17.08■□□□□ 0.32
COL16A1-211ENST00000479100 FAM126BQ8IXS8 530 aa17.08■□□□□ 0.32
COL16A1-211ENST00000479100 TNPO1Q92973 898 aaKnown RBP17.08■□□□□ 0.32
COL16A1-211ENST00000479100 ATP6V0A1Q93050 837 aa17.08■□□□□ 0.32
COL16A1-211ENST00000479100 DYDC2Q96IM9 177 aa17.08■□□□□ 0.32
COL16A1-211ENST00000479100 ZNF396Q96N95 335 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-211ENST00000479100 STXBP5LQ9Y2K9 1186 aa17.08■□□□□ 0.32
COL16A1-211ENST00000479100 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.32
COL16A1-211ENST00000479100 MAFBQ9Y5Q3 323 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-211ENST00000479100 GNAT1P11488 350 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 CYP2C9P11712 490 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 INSRRP14616 1297 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 ATP4AP20648 1035 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 PRKCEQ02156 737 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 CYP4A11Q02928 519 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 GRIK4Q16099 956 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 SESTD1Q86VW0 696 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 ATP8B4Q8TF62 1192 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 EIF2AK1Q9BQI3 630 aaKnown RBP17.07■□□□□ 0.32
COL16A1-211ENST00000479100 RAB34Q9BZG1 259 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 NRBP2Q9NSY0 501 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 RGL1Q9NZL6 768 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
COL16A1-211ENST00000479100 LRWD1Q9UFC0 647 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 TBX21Q9UL17 535 aa17.07■□□□□ 0.32
COL16A1-211ENST00000479100 IGSF9BQ9UPX0 1349 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 LTBP2Q14767 1821 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 VWA3AA6NCI4 1184 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 DDX11L8A8MPP1 907 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 ZNF862O60290 1169 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 HBP1O60381 514 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 BRD1O95696 1058 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 CD4P01730 458 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 P4HBP07237 508 aaKnown RBP17.06■□□□□ 0.32
COL16A1-211ENST00000479100 PRPHP41219 470 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 QARSP47897 775 aaKnown RBP17.06■□□□□ 0.32
COL16A1-211ENST00000479100 FXR2P51116 673 aaKnown RBP eCLIP17.06■□□□□ 0.32
COL16A1-211ENST00000479100 PSMC5P62195 406 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 CTTNQ14247 550 aaKnown RBP17.06■□□□□ 0.32
COL16A1-211ENST00000479100 TPH2Q8IWU9 490 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 ERMNQ8TAM6 284 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 LMBR1Q8WVP7 490 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 TRAPPC12Q8WVT3 735 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 FAM167AQ96KS9 214 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 GUCD1Q96NT3 240 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 USP28Q96RU2 1077 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 ZDHHC9Q9Y397 364 aa17.06■□□□□ 0.32
COL16A1-211ENST00000479100 NRCAMQ92823 1304 aa17.05■□□□□ 0.32
COL16A1-211ENST00000479100 RRN3P2A6NIE6 340 aa17.05■□□□□ 0.32
COL16A1-211ENST00000479100 TREHO43280 583 aa17.05■□□□□ 0.32
COL16A1-211ENST00000479100 DKC1O60832 514 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL16A1-211ENST00000479100 OATP04181 439 aa17.05■□□□□ 0.32
COL16A1-211ENST00000479100 MARCKSP29966 332 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-211ENST00000479100 HIC1Q14526 733 aa17.05■□□□□ 0.32
COL16A1-211ENST00000479100 STK38Q15208 465 aa17.05■□□□□ 0.32
COL16A1-211ENST00000479100 IL17AQ16552 155 aa17.05■□□□□ 0.32
COL16A1-211ENST00000479100 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-211ENST00000479100 LXNQ9BS40 222 aa17.05■□□□□ 0.32
COL16A1-211ENST00000479100 PPP1R12CQ9BZL4 782 aa17.05■□□□□ 0.32
COL16A1-211ENST00000479100 SEPT9Q9UHD8 586 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-211ENST00000479100 SLITRK3O94933 977 aa17.04■□□□□ 0.32
COL16A1-211ENST00000479100 RAG1P15918 1043 aa17.04■□□□□ 0.32
COL16A1-211ENST00000479100 PDIA5Q14554 519 aa17.04■□□□□ 0.32
COL16A1-211ENST00000479100 XKR3Q5GH77 459 aa17.04■□□□□ 0.32
COL16A1-211ENST00000479100 ZNF484Q5JVG2 852 aa17.04■□□□□ 0.32
COL16A1-211ENST00000479100 ARL6IP4Q66PJ3 421 aaKnown RBP17.04■□□□□ 0.32
COL16A1-211ENST00000479100 NEK9Q8TD19 979 aa17.04■□□□□ 0.32
COL16A1-211ENST00000479100 ZBTB10Q96DT7 871 aa17.04■□□□□ 0.32
COL16A1-211ENST00000479100 ZSWIM4Q9H7M6 989 aa17.04■□□□□ 0.32
COL16A1-211ENST00000479100 TMEM150BA6NC51 233 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 PP2D1A8MPX8 630 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 TIMP1P01033 207 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 NCLP19338 710 aaKnown RBP17.03■□□□□ 0.32
COL16A1-211ENST00000479100 CCT6AP40227 531 aaKnown RBP17.03■□□□□ 0.32
COL16A1-211ENST00000479100 NUCB2P80303 420 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 DNM1Q05193 864 aaKnown RBP17.03■□□□□ 0.32
COL16A1-211ENST00000479100 PTPAQ15257 358 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
COL16A1-211ENST00000479100 MTERF2Q49AM1 385 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 IGSF22Q8N9C0 903 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 SLC17A8Q8NDX2 589 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 SNX29Q8TEQ0 813 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 HSD17B14Q9BPX1 270 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 SH2D3AQ9BRG2 576 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 HIPK3Q9H422 1215 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 WRAP73Q9P2S5 460 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-211ENST00000479100 TUBE1Q9UJT0 475 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 UNC80Q8N2C7 3258 aa17.03■□□□□ 0.32
COL16A1-211ENST00000479100 VCANP13611 3396 aa17.02■□□□□ 0.32
COL16A1-211ENST00000479100 MED24O75448 989 aa17.02■□□□□ 0.32
COL16A1-211ENST00000479100 KLRC1P26715 233 aa17.02■□□□□ 0.32
COL16A1-211ENST00000479100 CDC25AP30304 524 aa17.02■□□□□ 0.32
COL16A1-211ENST00000479100 HOXC8P31273 242 aa17.02■□□□□ 0.32
COL16A1-211ENST00000479100 CYP2C18P33260 490 aa17.02■□□□□ 0.32
COL16A1-211ENST00000479100 SMAD3P84022 425 aaKnown RBP17.02■□□□□ 0.32
COL16A1-211ENST00000479100 PTK7Q13308 1070 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms