RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 FAM81BQ96LP2 452 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 MSTO1Q9BUK6 570 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 PLCB1Q9NQ66 1216 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 FGFR2P21802 821 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 GCLMP48507 274 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 MRPS9P82933 396 aaKnown RBP15.41■□□□□ 0.06
NPHP4-208ENST00000478423 ANKRD42Q8N9B4 389 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 NLRP7Q8WX94 980 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 RGL1Q9NZL6 768 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 NYAP2Q9P242 653 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 PTPN22Q9Y2R2 807 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 ENTPD3O75355 529 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 PPP4CP60510 307 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 PDIA5Q14554 519 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 CEP57Q86XR8 500 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 TRIM50Q86XT4 487 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 MGARPQ8TDB4 240 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 HPS3Q969F9 1004 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 LXNQ9BS40 222 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 DNAJC12Q9UKB3 198 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 DAAM1Q9Y4D1 1078 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 CNTNAP5Q8WYK1 1306 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 PASKQ96RG2 1323 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 CCDC151A5D8V7 595 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 SLC16A4O15374 487 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 GYS1P13807 737 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 HMGCS2P54868 508 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 IFRD2Q12894 506 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-208ENST00000478423 APOBEC3FQ8IUX4 373 aaKnown RBP15.4■□□□□ 0.06
NPHP4-208ENST00000478423 PALM2Q8IXS6 379 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 TRIM11Q96F44 468 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 ANAPC4Q9UJX5 808 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 PNMA3Q9UL41 463 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 LRRC53A6NM62 1247 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 PHLDB2Q86SQ0 1253 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 C7orf31Q8N865 590 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 DPF2Q92785 391 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 EIF2AK1Q9BQI3 630 aaKnown RBP15.4■□□□□ 0.06
NPHP4-208ENST00000478423 RNF181Q9P0P0 153 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 RNF14Q9UBS8 474 aa15.4■□□□□ 0.06
NPHP4-208ENST00000478423 BAZ2BQ9UIF8 2168 aaKnown RBP15.4■□□□□ 0.06
NPHP4-208ENST00000478423 C10orf76Q5T2E6 689 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 NEK9Q8TD19 979 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 TYW1Q9NV66 732 aaKnown RBP15.39■□□□□ 0.05
NPHP4-208ENST00000478423 SYNJ2BP-COX16A0A087WUM0 186 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 UBE2Q2LH0YL09 131 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 KCNB1Q14721 858 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 OTUD5Q96G74 571 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 PARD6BQ9BYG5 372 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 MED4Q9NPJ6 270 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 COX16Q9P0S2 106 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 GABBR1Q9UBS5 961 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 ATF2P15336 505 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 SLFN12LQ6IEE8 588 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 FAM49AQ9H0Q0 323 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-208ENST00000478423 CNOT7Q9UIV1 285 aaKnown RBP15.39■□□□□ 0.05
NPHP4-208ENST00000478423 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-208ENST00000478423 C2orf54Q08AI8 447 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 NAALADL2Q58DX5 795 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 SWSAP1Q6NVH7 229 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 UBE2Q2Q8WVN8 375 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 CEP72Q9P209 647 aa15.39■□□□□ 0.05
NPHP4-208ENST00000478423 SPOUT1Q5T280 376 aaKnown RBP15.38■□□□□ 0.05
NPHP4-208ENST00000478423 FYB2Q5VWT5 728 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 MAP7D3Q8IWC1 876 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 MICALL2Q8IY33 904 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 HOMER3Q9NSC5 361 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.38■□□□□ 0.05
NPHP4-208ENST00000478423 SEL1LQ9UBV2 794 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 MROH1Q8NDA8 1641 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 DENND3A2RUS2 1198 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 STXBP3O00186 592 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 CLDN3O15551 220 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 ABL1P00519 1130 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 FDX1P10109 184 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 KCTD16Q68DU8 428 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 NSMCE1Q8WV22 266 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 TMEM60Q9H2L4 133 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 ATP6V0A4Q9HBG4 840 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 MRPL47Q9HD33 250 aaKnown RBP15.38■□□□□ 0.05
NPHP4-208ENST00000478423 SCAF8Q9UPN6 1271 aaKnown RBP15.38■□□□□ 0.05
NPHP4-208ENST00000478423 GNGT1P63211 74 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 FMR1Q06787 632 aaKnown RBP eCLIP15.38■□□□□ 0.052e-17■■■■■ 60.8
NPHP4-208ENST00000478423 GEN1Q17RS7 908 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 VSIG1Q86XK7 387 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 RPAP3Q9H6T3 665 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-208ENST00000478423 PRR12Q9ULL5 1215 aa15.38■□□□□ 0.05
NPHP4-208ENST00000478423 SFNP31947 248 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 STX2P32856 288 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 PLTPP55058 493 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 GRIN1Q05586 938 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 ANKRD40Q6AI12 368 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 DNAJC24Q6P3W2 148 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 SCARA5Q6ZMJ2 495 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 P3H4Q92791 437 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 ACAD9Q9H845 621 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 ADGRG1Q9Y653 693 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 H7C0C1 242 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 ATP5OP48047 213 aa15.37■□□□□ 0.05
NPHP4-208ENST00000478423 SEMA3FQ13275 785 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms