RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PNLIPP16233 465 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 STIP1P31948 543 aaKnown RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 PDE6BP35913 854 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 GRIA2P42262 883 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 HTR3AP46098 478 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 SARSP49591 514 aaKnown RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 CYP4F8P98187 520 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 CYP4F3Q08477 520 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 DMTNQ08495 405 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 MAP4K2Q12851 820 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 KCNAB2Q13303 367 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 KIF22Q14807 665 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 SF1Q15637 639 aaKnown RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 PARP10Q53GL7 1025 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 BRDTQ58F21 947 aaPredicted RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 FAM83BQ5T0W9 1011 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 E4F1Q66K89 784 aaPredicted RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 PPP4R3AQ6IN85 833 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 CFAP161Q6P656 301 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 CCBE1Q6UXH8 406 aaPredicted RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 KRT26Q7Z3Y9 468 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 CPNE8Q86YQ8 564 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 IRF2BP1Q8IU81 584 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 TMEM145Q8NBT3 493 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 NLGN2Q8NFZ4 835 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 NPLOC4Q8TAT6 608 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 SH3TC2Q8TF17 1288 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 KCTD13Q8WZ19 329 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 NELL1Q92832 810 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 RPGRQ92834 1020 aaKnown RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 MPP4Q96JB8 637 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 MMP19Q99542 508 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 SELENOOQ9BVL4 669 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 TEX13AQ9BXU3 409 aaPredicted RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 PTPRHQ9HD43 1115 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 PDLIM7Q9NR12 457 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 ARHGEF4Q9NR80 690 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 LUZP4Q9P127 313 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 EVLQ9UI08 416 aaPredicted RBP4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 HDAC9Q9UKV0 1011 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 KIF16BQ96L93 1317 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 ARHGEF11O15085 1522 aa4.09□□□□□ -1.75
FNDC3B-209ENST00000478016 TARBP1Q13395 1621 aaKnown RBP4.09□□□□□ -1.76
FNDC3B-209ENST00000478016 KAT6BQ8WYB5 2073 aa4.09□□□□□ -1.76
FNDC3B-209ENST00000478016 TRAV20A0A0B4J274 112 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 A0A1W2PQJ5 194 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 MEFVO15553 781 aaPredicted RBP4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 KCNQ2O43526 872 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 ADCY3O60266 1144 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 NPHS1O60500 1241 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 ZNF853P0CG23 659 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 MASP1P48740 699 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 GALK1P51570 392 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 MVKQ03426 396 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 TMEM94Q12767 1356 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 KIR3DS1Q14943 382 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 TESK1Q15569 626 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 PRSS53Q2L4Q9 553 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 DNTTIP2Q5QJE6 756 aaKnown RBP4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 ARMC3Q5W041 872 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 CTR9Q6PD62 1173 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 WDR75Q8IWA0 830 aaKnown RBP4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 SIRT2Q8IXJ6 389 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 ZBTB38Q8NAP3 1195 aaPredicted RBP4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 ERCC4Q92889 916 aaPredicted RBP4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 TEKT1Q969V4 418 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 VMP1Q96GC9 406 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 C1orf159Q96HA4 380 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 ZNF396Q96N95 335 aaPredicted RBP4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 NELL2Q99435 816 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 PIK3R4Q99570 1358 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 DNAJC7Q99615 494 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 VPS33BQ9H267 617 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 EPB41L4BQ9H329 900 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 PPCSQ9HAB8 311 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 TRPV5Q9NQA5 729 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 SH3GLB2Q9NR46 395 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 CPSF2Q9P2I0 782 aaKnown RBP4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 TAGLN3Q9UI15 199 aa4.08□□□□□ -1.76
FNDC3B-209ENST00000478016 POLA1P09884 1462 aaPredicted RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 KDM2BQ8NHM5 1336 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 C7orf72A4D263 438 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 OR14I1A6ND48 311 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 PRODHO43272 600 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 MYO1BO43795 1136 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 DLX3O60479 287 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 CDC45O75419 566 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 ARIH2O95376 493 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 MPOP05164 745 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 PABPC1P11940 636 aaKnown RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 IDEP14735 1019 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 TYRP1P17643 537 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 PMLP29590 882 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 LTBRP36941 435 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 ERVFRD-1P60508 538 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 ROR1Q01973 937 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 COX10Q12887 443 aa4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 EIF2B5Q13144 721 aaKnown RBP4.07□□□□□ -1.76
FNDC3B-209ENST00000478016 KRT72Q14CN4 511 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms