RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 CERS4Q9HA82 394 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 TCEAL9Q9UHQ7 104 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 TSR3Q9UJK0 312 aaKnown RBP9.43□□□□□ -0.9
ERCC8-205ENST00000477893 TPCN1Q9ULQ1 816 aa9.43□□□□□ -0.9
ERCC8-205ENST00000477893 RSPH10B2B2RC85 870 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 BACH1O14867 736 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 EPB41L2O43491 1005 aaKnown RBP9.42□□□□□ -0.9
ERCC8-205ENST00000477893 RSPH10BP0C881 870 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 GNA11P29992 359 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 AK2P54819 239 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 ACTR2P61160 394 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 DEFB103AP81534 67 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 SCRN1Q12765 414 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 MBTPS1Q14703 1052 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 GPNMBQ14956 572 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 GRIK4Q16099 956 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 PRR16Q569H4 304 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 PPP2R2DQ66LE6 453 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 CPLX2Q6PUV4 134 aaKnown RBP9.42□□□□□ -0.9
ERCC8-205ENST00000477893 NECAB1Q8N987 351 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 MAFAQ8NHW3 353 aaPredicted RBP9.42□□□□□ -0.9
ERCC8-205ENST00000477893 BICD2Q8TD16 824 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 TRAPPC12Q8WVT3 735 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 PPM1EQ8WY54 764 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 ZNF775Q96BV0 537 aaPredicted RBP9.42□□□□□ -0.9
ERCC8-205ENST00000477893 ZNF274Q96GC6 653 aaPredicted RBP9.42□□□□□ -0.9
ERCC8-205ENST00000477893 ZNF577Q9BSK1 485 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 FAM49AQ9H0Q0 323 aaPredicted RBP9.42□□□□□ -0.9
ERCC8-205ENST00000477893 SLKQ9H2G2 1235 aaPredicted RBP9.42□□□□□ -0.9
ERCC8-205ENST00000477893 SLC28A3Q9HAS3 691 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 ERAP1Q9NZ08 941 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 KCNJ14Q9UNX9 436 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 CHD9Q3L8U1 2897 aa9.42□□□□□ -0.9
ERCC8-205ENST00000477893 ESYT2A0FGR8 921 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 MEIS1O00470 390 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 CHMP2AO43633 222 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 DEXIO95424 95 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 LARGE1O95461 756 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 CCNE2O96020 404 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 CA3P07451 260 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 GNAT1P11488 350 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 IBSPP21815 317 aaPredicted RBP9.41□□□□□ -0.9
ERCC8-205ENST00000477893 IGFBP4P22692 258 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 EVCP57679 992 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 WDR5P61964 334 aaKnown RBP9.41□□□□□ -0.9
ERCC8-205ENST00000477893 TMEM62Q0P6H9 643 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 CNKSR3Q6P9H4 555 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 HERC6Q8IVU3 1022 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 MICALL1Q8N3F8 863 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 GJA10Q969M2 543 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 SLC9A7Q96T83 725 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 PCYT2Q99447 389 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 OSBPL7Q9BZF2 842 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 SMARCAD1Q9H4L7 1026 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 GJB4Q9NTQ9 266 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 TUBE1Q9UJT0 475 aa9.41□□□□□ -0.9
ERCC8-205ENST00000477893 GBF1Q92538 1859 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 NFASCO94856 1347 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 EMSYQ7Z589 1322 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 NRCAMQ92823 1304 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 IGLV3-22A0A075B6J6 115 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 TMEM265A0A087WTH1 108 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 IPO5O00410 1097 aaKnown RBP9.4□□□□□ -0.9
ERCC8-205ENST00000477893 MAFGO15525 162 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 TLL1O43897 1013 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 PFKFB2O60825 505 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 LGR5O75473 907 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 CDKL5O76039 1030 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 BAIAP3O94812 1187 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 ARHGEF15O94989 841 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 GHRP10912 638 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 INSRRP14616 1297 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 HOXC8P31273 242 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 NEK4P51957 841 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.9
ERCC8-205ENST00000477893 RBL2Q08999 1139 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 PLCB4Q15147 1175 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.4□□□□□ -0.9
ERCC8-205ENST00000477893 SPRED2Q7Z698 418 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 CCDC60Q8IWA6 550 aaPredicted RBP9.4□□□□□ -0.9
ERCC8-205ENST00000477893 DBF4BQ8NFT6 615 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 TBCKQ8TEA7 893 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 DNAJB3Q8WWF6 145 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 PPP1R16BQ96T49 567 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 GAS2L1Q99501 681 aaPredicted RBP9.4□□□□□ -0.9
ERCC8-205ENST00000477893 MTUS1Q9ULD2 1270 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 PCDHA4Q9UN74 947 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 SAMM50Q9Y512 469 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 PCDHA11Q9Y5I1 949 aa9.4□□□□□ -0.9
ERCC8-205ENST00000477893 TRIP12Q14669 1992 aaPredicted RBP9.4□□□□□ -0.9
ERCC8-205ENST00000477893 EYSQ5T1H1 3165 aa9.4□□□□□ -0.91
ERCC8-205ENST00000477893 LCHNA4D1U4 455 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 RFXAPO00287 272 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 UPP2O95045 317 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 TDP2O95551 362 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 CXCL10P02778 98 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 CYP3A4P08684 503 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 STAT5BP51692 787 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 ANAPC15P60006 121 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 IKBKEQ14164 716 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms