RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 FAM83GA6ND36 823 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 SCDO00767 359 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 KCNK3O14649 394 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 HSP90B1P14625 803 aaKnown RBP6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 ZNF28P17035 718 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 AOAHP28039 575 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 AMPD3Q01432 767 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 RTP5Q14D33 572 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 DHCR24Q15392 516 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 SKIDA1Q1XH10 827 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 FAM26FQ5R3K3 315 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 CPZQ66K79 652 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 OR2W6PQ8NHA6 318 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 ZKSCAN5Q9Y2L8 839 aa6.42□□□□□ -1.38
SMNDC1-205ENST00000477763 A0A1B0GTL3 188 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 PRAMEF25A6NGN4 478 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 SASH1O94885 1247 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 KCNC1P48547 511 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 FSTL4Q6MZW2 842 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 CC2D1AQ6P1N0 951 aaPredicted RBP6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 PKN3Q6P5Z2 889 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 ADGRG2Q8IZP9 1017 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 ZSWIM3Q96MP5 696 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 BTBD7Q9P203 1132 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 ARHGAP20Q9P2F6 1191 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 ARHGAP28Q9P2N2 729 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 RAPGEFL1Q9UHV5 662 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 MCM8Q9UJA3 840 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 ATP8A1Q9Y2Q0 1164 aa6.41□□□□□ -1.38
SMNDC1-205ENST00000477763 PTPDC1A2A3K4 754 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 GAS7O60861 476 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 BMP7P18075 431 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 PTGS1P23219 599 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 IL13P35225 146 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 SMAD2Q15796 467 aaKnown RBP6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 PRAMEF18Q5VWM3 479 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 LILRA6Q6PI73 481 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 ZNF761Q86XN6 746 aaPredicted RBP6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 ATL2Q8NHH9 583 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 ADAMTS17Q8TE56 1095 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 SPATA25Q9BR10 227 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 PARD6AQ9NPB6 346 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 KCND1Q9NSA2 647 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 ZFP69BQ9UJL9 534 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 CROTQ9UKG9 612 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 ASB1Q9Y576 335 aa6.4□□□□□ -1.38
SMNDC1-205ENST00000477763 C9orf118A6NHY6 69 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 DDX3XO00571 662 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 FOXP2O15409 715 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 FBXO21O94952 628 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 F2P00734 622 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 COL6A1P12109 1028 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 FNTBP49356 437 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 MLLT6P55198 1093 aaPredicted RBP6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 STRN3Q13033 797 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 TTLL10Q6ZVT0 673 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 AFAP1L2Q8N4X5 818 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 ASB15Q8WXK1 588 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 ZCCHC14Q8WYQ9 949 aaKnown RBP6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 USP7Q93009 1102 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 YTHDC1Q96MU7 727 aaKnown RBP6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 ZCCHC4Q9H5U6 513 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 L2HGDHQ9H9P8 463 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 SLC39A2Q9NP94 309 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 INCENPQ9NQS7 918 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 ACSS2Q9NR19 701 aa6.39□□□□□ -1.39
SMNDC1-205ENST00000477763 H7C1D1 291 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 NOBOXO60393 691 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 BRINP1O60477 761 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 IL18BPO95998 194 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 KNG1P01042 644 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 MMEP08473 750 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 GJA9P57773 515 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 OCRLQ01968 901 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 SEPT7Q16181 437 aaKnown RBP6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 CATSPEREQ5SY80 951 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 DPP8Q6V1X1 898 aaPredicted RBP6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 DDX42Q86XP3 938 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 TTC1Q99614 292 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 GALNT8Q9NY28 637 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 FTSJ1Q9UET6 329 aa6.38□□□□□ -1.39
SMNDC1-205ENST00000477763 RASSF10A6NK89 507 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 DVL2O14641 736 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 ZEB2O60315 1214 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 MPIG6BO95866 241 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 CYP17A1P05093 508 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 CDK11BP21127 795 aaKnown RBP6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 GLRBP48167 497 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 KIF11P52732 1056 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 DSG1Q02413 1049 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 TMEM132BQ14DG7 1078 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 ZNF174Q15697 407 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 CREB3L3Q68CJ9 461 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 TRMT10BQ6PF06 316 aaKnown RBP6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 CXXC5Q7LFL8 322 aaKnown RBP6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 STRA8Q7Z7C7 330 aa6.37□□□□□ -1.39
SMNDC1-205ENST00000477763 STPG3Q8N7X2 389 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms