RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 PTK2Q05397 1052 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 MESDQ14696 234 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 EXOC3L4Q17RC7 722 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 ADGRF4Q8IZF3 695 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 CASKIN2Q8WXE0 1202 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 MAGOHBQ96A72 148 aaKnown RBP10.67□□□□□ -0.7
CMC1-209ENST00000477739 CTTNBP2NLQ9P2B4 639 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 LRP5O75197 1615 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 MYH13Q9UKX3 1938 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 PDHBP11177 359 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 ICE2Q659A1 982 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 CHADLQ6NUI6 762 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 GIMAP7Q8NHV1 300 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 KBTBD4Q9NVX7 518 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 FBXL5Q9UKA1 691 aa10.67□□□□□ -0.7
CMC1-209ENST00000477739 TTLL1O95922 423 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 RBM26Q5T8P6 1007 aaKnown RBP10.66□□□□□ -0.7
CMC1-209ENST00000477739 KCNQ5Q9NR82 932 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 MTMR4Q9NYA4 1195 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 CLRN2A0PK11 232 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 DCDC2CA8MYV0 355 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 FLT3P36888 993 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 KCNJ1P48048 391 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 NFIAQ12857 509 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 EPC2Q52LR7 807 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 ZNF507Q8TCN5 953 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 ANKS1AQ92625 1134 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 TEKT1Q969V4 418 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 BTBD6Q96KE9 485 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 VEZTQ9HBM0 779 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 PPP1R12BO60237 982 aaPredicted RBP10.66□□□□□ -0.7
CMC1-209ENST00000477739 MYBL1P10243 752 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 KCNB1Q14721 858 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 ASPRV1Q53RT3 343 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 EAPPQ56P03 285 aaPredicted RBP10.66□□□□□ -0.7
CMC1-209ENST00000477739 PPP1R18Q6NYC8 613 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 VPS36Q86VN1 386 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 GDAP1Q8TB36 358 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 CUL5Q93034 780 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 MMTAG2Q9BU76 263 aaKnown RBP10.66□□□□□ -0.7
CMC1-209ENST00000477739 CUEDC2Q9H467 287 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 BLOC1S4Q9NUP1 217 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 USP20Q9Y2K6 914 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 AFF2P51816 1311 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 ITIH6Q6UXX5 1313 aa10.66□□□□□ -0.7
CMC1-209ENST00000477739 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.65□□□□□ -0.7
CMC1-209ENST00000477739 MYL1P05976 194 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 NF2P35240 595 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 RHBDL3P58872 404 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 COG2Q14746 738 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 PPP1R7Q15435 360 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 MUM1L1Q5H9M0 696 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 KLHDC7AQ5VTJ3 777 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 PDXDC1Q6P996 788 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 CCDC170Q8IYT3 715 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 HNRNPLLQ8WVV9 542 aaKnown RBP10.65□□□□□ -0.7
CMC1-209ENST00000477739 PNMA5Q96PV4 448 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 USTQ9Y2C2 406 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 TISP43B9A030 160 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 EXOC3O60645 756 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 ACSL3O95573 720 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 ADRA2BP18089 450 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 PRPHP41219 470 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 COL16A1Q07092 1604 aaPredicted RBP10.65□□□□□ -0.7
CMC1-209ENST00000477739 UNC13DQ70J99 1090 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 DAGLBQ8NCG7 672 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 RAD54LQ92698 747 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 HOOK2Q96ED9 719 aa10.65□□□□□ -0.7
CMC1-209ENST00000477739 SART1O43290 800 aaKnown RBP10.65□□□□□ -0.71
CMC1-209ENST00000477739 CTNND1O60716 968 aaKnown RBP10.65□□□□□ -0.71
CMC1-209ENST00000477739 FGFR4P22455 802 aa10.65□□□□□ -0.71
CMC1-209ENST00000477739 MAP2K1Q02750 393 aaPredicted RBP10.65□□□□□ -0.71
CMC1-209ENST00000477739 GBP6Q6ZN66 633 aa10.65□□□□□ -0.71
CMC1-209ENST00000477739 ZFPM1Q8IX07 1006 aa10.65□□□□□ -0.71
CMC1-209ENST00000477739 KAT2BQ92831 832 aa10.65□□□□□ -0.71
CMC1-209ENST00000477739 PLAGL2Q9UPG8 496 aa10.65□□□□□ -0.71
CMC1-209ENST00000477739 DNM3Q9UQ16 869 aa10.65□□□□□ -0.71
CMC1-209ENST00000477739 RGL2O15211 777 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 SPOPO43791 374 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 LSP1P33241 339 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 TNIP1Q15025 636 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 SMAD1Q15797 465 aaKnown RBP10.64□□□□□ -0.71
CMC1-209ENST00000477739 PAPD7Q5XG87 772 aaKnown RBP10.64□□□□□ -0.71
CMC1-209ENST00000477739 MIGA2Q7L4E1 593 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 QTRT2Q9H974 415 aaKnown RBP10.64□□□□□ -0.71
CMC1-209ENST00000477739 PLCB1Q9NQ66 1216 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 CHD4Q14839 1912 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 A0A1W2PQC6 194 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 TULP2O00295 520 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 EIF3HO15372 352 aaKnown RBP eCLIP10.64□□□□□ -0.71
CMC1-209ENST00000477739 PIAS1O75925 651 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 IL1R1P14778 569 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 NT5C2P49902 561 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 NAA25Q14CX7 972 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 SEPT2Q15019 361 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 DAB2IPQ5VWQ8 1189 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 COA1Q9GZY4 146 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 MAGEF1Q9HAY2 307 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 PNMA2Q9UL42 364 aa10.64□□□□□ -0.71
CMC1-209ENST00000477739 TIAM2Q8IVF5 1701 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms