RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 AFAP1L1Q8TED9 768 aa11.05□□□□□ -0.64
NIFK-205ENST00000477693 GLG1Q92896 1179 aa11.05□□□□□ -0.64
NIFK-205ENST00000477693 SLC5A5Q92911 643 aa11.05□□□□□ -0.64
NIFK-205ENST00000477693 NAP1L4Q99733 375 aaKnown RBP11.05□□□□□ -0.64
NIFK-205ENST00000477693 WNT8AQ9H1J5 351 aa11.05□□□□□ -0.64
NIFK-205ENST00000477693 RNPEPQ9H4A4 650 aa11.05□□□□□ -0.64
NIFK-205ENST00000477693 AZI2Q9H6S1 392 aa11.05□□□□□ -0.64
NIFK-205ENST00000477693 SCUBE2Q9NQ36 999 aa11.05□□□□□ -0.64
NIFK-205ENST00000477693 TCEAL9Q9UHQ7 104 aa11.05□□□□□ -0.64
NIFK-205ENST00000477693 CEP131Q9UPN4 1083 aa11.05□□□□□ -0.64
NIFK-205ENST00000477693 NRCAMQ92823 1304 aa11.05□□□□□ -0.64
NIFK-205ENST00000477693 DDX39AO00148 427 aaKnown RBP11.04□□□□□ -0.64
NIFK-205ENST00000477693 SLC37A4O43826 429 aa11.04□□□□□ -0.64
NIFK-205ENST00000477693 PSMD10O75832 226 aa11.04□□□□□ -0.64
NIFK-205ENST00000477693 GNAT1P11488 350 aa11.04□□□□□ -0.64
NIFK-205ENST00000477693 CSF2RAP15509 400 aa11.04□□□□□ -0.64
NIFK-205ENST00000477693 PTK7Q13308 1070 aa11.04□□□□□ -0.64
NIFK-205ENST00000477693 PPIGQ13427 754 aaKnown RBP eCLIP11.04□□□□□ -0.64
NIFK-205ENST00000477693 BFSP2Q13515 415 aa11.04□□□□□ -0.64
NIFK-205ENST00000477693 SERINC5Q86VE9 423 aa11.04□□□□□ -0.64
NIFK-205ENST00000477693 CCDC155Q8N6L0 562 aa11.04□□□□□ -0.64
NIFK-205ENST00000477693 DHX38Q92620 1227 aaKnown RBP11.04□□□□□ -0.64
NIFK-205ENST00000477693 KCNMB3Q9NPA1 279 aa11.04□□□□□ -0.64
NIFK-205ENST00000477693 DDX25Q9UHL0 483 aaKnown RBP11.04□□□□□ -0.64
NIFK-205ENST00000477693 COL6A3P12111 3177 aa11.04□□□□□ -0.64
NIFK-205ENST00000477693 FAM205CA6NFA0 338 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 WDR64B1ANS9 1081 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 TBX3O15119 743 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 CCNT1O60563 726 aaKnown RBP11.03□□□□□ -0.64
NIFK-205ENST00000477693 GAS7O60861 476 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 YEATS4O95619 227 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 NCLP19338 710 aaKnown RBP11.03□□□□□ -0.64
NIFK-205ENST00000477693 MARK3P27448 753 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 MCM4P33991 863 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 STAT5BP51692 787 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 FOSBP53539 338 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 EPHB4P54760 987 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 CCL23P55773 120 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 ZNF200P98182 395 aaPredicted RBP11.03□□□□□ -0.64
NIFK-205ENST00000477693 GUCY1B3Q02153 619 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 TRIM71Q2Q1W2 868 aaKnown RBP11.03□□□□□ -0.64
NIFK-205ENST00000477693 SKOR2Q2VWA4 1001 aaPredicted RBP11.03□□□□□ -0.64
NIFK-205ENST00000477693 LRIT3Q3SXY7 679 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 LRCH2Q5VUJ6 765 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 FAM160B1Q5W0V3 765 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 MIS18BP1Q6P0N0 1132 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 B3GNT9Q6UX72 402 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 CCDC60Q8IWA6 550 aaPredicted RBP11.03□□□□□ -0.64
NIFK-205ENST00000477693 TMEM87AQ8NBN3 555 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 KCNG4Q8TDN1 519 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 LMBR1Q8WVP7 490 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 ATP6V0A1Q93050 837 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 UIMC1Q96RL1 719 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 TEKT3Q9BXF9 490 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 IL23AQ9NPF7 189 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 SETD4Q9NVD3 440 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 PCDHA10Q9Y5I2 948 aa11.03□□□□□ -0.64
NIFK-205ENST00000477693 MAFBQ9Y5Q3 323 aaPredicted RBP11.03□□□□□ -0.64
NIFK-205ENST00000477693 MBLAC1A4D2B0 266 aaPredicted RBP11.02□□□□□ -0.65
NIFK-205ENST00000477693 BACH1O14867 736 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 TREHO43280 583 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 CAND2O75155 1236 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.65
NIFK-205ENST00000477693 PSAPP07602 524 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 PFKMP08237 780 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 IQCF3P0C7M6 154 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 CKBP12277 381 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 SFNP31947 248 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 RFC2P35250 354 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 JAK3P52333 1124 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 PPFIA1Q13136 1202 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 PLCB4Q15147 1175 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 SHHQ15465 462 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 GRIK4Q16099 956 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 C9orf50Q5SZB4 431 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 PSRC1Q6PGN9 363 aaPredicted RBP11.02□□□□□ -0.65
NIFK-205ENST00000477693 C16orf59Q7L2K0 433 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 FERMT3Q86UX7 667 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 RETREG2Q8NC44 543 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 RDM1Q8NG50 284 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 WNT8BQ93098 351 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 VWCEQ96DN2 955 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 SCLYQ96I15 445 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 FAM20AQ96MK3 541 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 ANP32EQ9BTT0 268 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 ZNF302Q9NR11 478 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.02□□□□□ -0.65
NIFK-205ENST00000477693 DISC1Q9NRI5 854 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 RCOR1Q9UKL0 485 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 IGSF9BQ9UPX0 1349 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 LAMA3Q16787 3333 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 TANC1Q9C0D5 1861 aa11.02□□□□□ -0.65
NIFK-205ENST00000477693 POTEB3A0JP26 581 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 RRN3P2A6NIE6 340 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 LAD1O00515 517 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 WNT7AO00755 349 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 HBP1O60381 514 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 INSRRP14616 1297 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 SELPP16109 830 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 NASPP49321 788 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms