RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CISD2Q8N5K1 135 aaKnown RBP6.28□□□□□ -1.4
UBR3-209ENST00000477461 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
UBR3-209ENST00000477461 DHRS4Q9BTZ2 278 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 ZNF747Q9BV97 191 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 SEC61A2Q9H9S3 476 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 UCKL1Q9NWZ5 548 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 SRRDQ9UH36 339 aa6.28□□□□□ -1.4
UBR3-209ENST00000477461 FAM221BA6H8Z2 402 aa6.27□□□□□ -1.41
UBR3-209ENST00000477461 KCNQ1P51787 676 aa6.27□□□□□ -1.41
UBR3-209ENST00000477461 R3HDM1Q15032 1099 aaKnown RBP6.27□□□□□ -1.41
UBR3-209ENST00000477461 SEC23AQ15436 765 aa6.27□□□□□ -1.41
UBR3-209ENST00000477461 ZNF568Q3ZCX4 644 aa6.27□□□□□ -1.41
UBR3-209ENST00000477461 DPP8Q6V1X1 898 aaPredicted RBP6.27□□□□□ -1.41
UBR3-209ENST00000477461 ADOQ96SZ5 270 aa6.27□□□□□ -1.41
UBR3-209ENST00000477461 C12orf65Q9H3J6 166 aaKnown RBP6.27□□□□□ -1.41
UBR3-209ENST00000477461 NDOR1Q9UHB4 597 aa6.27□□□□□ -1.41
UBR3-209ENST00000477461 HS3ST3A1Q9Y663 406 aa6.27□□□□□ -1.41
UBR3-209ENST00000477461 ARVCFO00192 962 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 WNT9AO14904 365 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 PTGS1P23219 599 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 GDF5P43026 501 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 RAC3P60763 192 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 GABREP78334 506 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 TOP3AQ13472 1001 aaPredicted RBP6.26□□□□□ -1.41
UBR3-209ENST00000477461 HS1BP3Q53T59 392 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 LRSAM1Q6UWE0 723 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 REXO1L1PQ8IX06 675 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 DPYSL5Q9BPU6 564 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 SMURF1Q9HCE7 757 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 INCENPQ9NQS7 918 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 GALNT8Q9NY28 637 aa6.26□□□□□ -1.41
UBR3-209ENST00000477461 MRPS23Q9Y3D9 190 aaKnown RBP6.26□□□□□ -1.41
UBR3-209ENST00000477461 ZNF561-AS1K7EIQ3 104 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 SCDO00767 359 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 GSTA4O15217 222 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 C4BPAP04003 597 aaKnown RBP6.25□□□□□ -1.41
UBR3-209ENST00000477461 IL13RA1P78552 427 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 TBR1Q16650 682 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 CRIP3Q6Q6R5 217 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 LARP4Q71RC2 724 aaKnown RBP eCLIP6.25□□□□□ -1.41
UBR3-209ENST00000477461 FUKQ8N0W3 1084 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 ZNF341Q9BYN7 854 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 KIAA1683Q9H0B3 1180 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 SLC52A2Q9HAB3 445 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 SIRPGQ9P1W8 387 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 COQ6Q9Y2Z9 468 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 NR2E1Q9Y466 385 aa6.25□□□□□ -1.41
UBR3-209ENST00000477461 CDC14BO60729 498 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 RASGRP1O95267 797 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 MMEP08473 750 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 FAM47CQ5HY64 1035 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 FIGNQ5HY92 759 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 AGBL4Q5VU57 503 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 FSTL4Q6MZW2 842 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 SORCS2Q96PQ0 1159 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 OR14A2Q96R54 314 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 AMNQ9BXJ7 453 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 BTBD7Q9P203 1132 aa6.24□□□□□ -1.41
UBR3-209ENST00000477461 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.23□□□□□ -1.41
UBR3-209ENST00000477461 SLPIP03973 132 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 HMGCRP04035 888 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 CR2P20023 1033 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 AOAHP28039 575 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 GJA4P35212 333 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 HMGA2P52926 109 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 CD83Q01151 205 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 PRKD1Q15139 912 aaPredicted RBP6.23□□□□□ -1.41
UBR3-209ENST00000477461 NRN1LQ496H8 165 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 TM4SF20Q53R12 229 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 OTOP2Q7RTS6 562 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 WDR48Q8TAF3 677 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 SLC7A14Q8TBB6 771 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 EXTL1Q92935 676 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 DEPDC7Q96QD5 511 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 DNAJC7Q99615 494 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 MRIQ9BWK5 157 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 ZDHHC5Q9C0B5 715 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 TESMINQ9Y4I5 508 aa6.23□□□□□ -1.41
UBR3-209ENST00000477461 PRAMEF22A3QJZ6 481 aa6.22□□□□□ -1.41
UBR3-209ENST00000477461 CUTAO60888 179 aa6.22□□□□□ -1.41
UBR3-209ENST00000477461 FZD7O75084 574 aa6.22□□□□□ -1.41
UBR3-209ENST00000477461 CLASP2O75122 1294 aaKnown RBP6.22□□□□□ -1.41
UBR3-209ENST00000477461 COMTP21964 271 aa6.22□□□□□ -1.41
UBR3-209ENST00000477461 LACTBP83111 547 aaPredicted RBP6.22□□□□□ -1.41
UBR3-209ENST00000477461 ZMAT1Q5H9K5 638 aa6.22□□□□□ -1.41
UBR3-209ENST00000477461 FILIP1Q7Z7B0 1213 aa6.22□□□□□ -1.41
UBR3-209ENST00000477461 MAGEB10Q96LZ2 347 aaPredicted RBP6.22□□□□□ -1.41
UBR3-209ENST00000477461 SEMA4AQ9H3S1 761 aa6.22□□□□□ -1.41
UBR3-209ENST00000477461 OAZ3Q9UMX2 235 aa6.22□□□□□ -1.41
UBR3-209ENST00000477461 MATN2O00339 956 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 PLSCR1O15162 318 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 MPIG6BO95866 241 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 NAT1P18440 290 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 ACO1P21399 889 aaKnown RBP6.21□□□□□ -1.42
UBR3-209ENST00000477461 ACVRL1P37023 503 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 ECE1P42892 770 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 ETV4P43268 484 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 RASA3Q14644 834 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 TMEM132BQ14DG7 1078 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 USP39Q53GS9 565 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms