RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 C1orf141Q5JVX7 400 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 GTF2IRD2BQ6EKJ0 949 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 ATF7IPQ6VMQ6 1270 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 MCM10Q7L590 875 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 GTF2IRD2Q86UP8 949 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 C8orf58Q8NAV2 365 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 NETO2Q8NC67 525 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 TSR2Q969E8 191 aaKnown RBP7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 PEX11GQ96HA9 241 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 GPRC5CQ9NQ84 441 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 R3HCC1Q9Y3T6 440 aaKnown RBP7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 COL18A1P39060 1754 aa7.31□□□□□ -1.24
CDKN1B-204ENST00000477087 C7orf72A4D263 438 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 SASH1O94885 1247 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 NCAM1P13591 858 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 IL2RBP14784 551 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 PHKG2P15735 406 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 LIMS1P48059 325 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 RBM25P49756 843 aaKnown RBP7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 EVA1CP58658 441 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 DCTN1Q14203 1278 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 VMACQ2NL98 169 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 LCE4AQ5TA78 99 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 ZNF530Q6P9A1 599 aaPredicted RBP7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 MARCH10Q8NA82 808 aaPredicted RBP7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 COPS5Q92905 334 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 MMP19Q99542 508 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 THUMPD2Q9BTF0 503 aaKnown RBP7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 API5Q9BZZ5 524 aaKnown RBP7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 RNF38Q9H0F5 515 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 RXFP1Q9HBX9 757 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 CYP26B1Q9NR63 512 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 TSPYL4Q9UJ04 414 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 LMO7Q8WWI1 1683 aa7.3□□□□□ -1.24
CDKN1B-204ENST00000477087 PTPRCP08575 1304 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 SPATA31A6Q5VVP1 1343 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 CAMTA1Q9Y6Y1 1673 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 B2RBV5 119 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 TRIM13O60858 407 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 FUCA1P04066 466 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 THBDP07204 575 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 HOXA5P20719 270 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 ETFBP38117 255 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 CTSWP56202 376 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 EIF4A1P60842 406 aaKnown RBP7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 TEFQ10587 303 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 CHRNA2Q15822 529 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 TOM1L2Q6ZVM7 507 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 TSPYL6Q8N831 410 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 ZCRB1Q8TBF4 217 aaKnown RBP7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 TSPAN17Q96FV3 270 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 MRGPRX3Q96LB0 322 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 KCNC2Q96PR1 638 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 MTA3Q9BTC8 594 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 NKX2-4Q9H2Z4 354 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 DDX19BQ9UMR2 479 aa7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 IBTKQ9P2D0 1353 aaPredicted RBP7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 COL5A2P05997 1499 aaPredicted RBP7.29□□□□□ -1.24
CDKN1B-204ENST00000477087 CYP27B1O15528 508 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 SUSD5O60279 629 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 ZBTB7AO95365 584 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 IGFBP6P24592 240 aaPredicted RBP7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 DNAJA1P31689 397 aaKnown RBP7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 FOXO4P98177 505 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 SLC9A5Q14940 896 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 CCDC30Q5VVM6 783 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 WWC2Q6AWC2 1192 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 IQCEQ6IPM2 695 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 SP8Q8IXZ3 490 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 EXOC6Q8TAG9 804 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 BTN2A2Q8WVV5 523 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 TINF2Q9BSI4 451 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 LGR4Q9BXB1 951 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 SLC52A2Q9HAB3 445 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 SMC4Q9NTJ3 1288 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 MARCH2Q9P0N8 246 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 NOB1Q9ULX3 412 aaKnown RBP7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 JCADQ9P266 1359 aa7.28□□□□□ -1.24
CDKN1B-204ENST00000477087 PCDH11XQ9BZA7 1347 aa7.27□□□□□ -1.24
CDKN1B-204ENST00000477087 PCDH11YQ9BZA8 1340 aa7.27□□□□□ -1.24
CDKN1B-204ENST00000477087 COL22A1Q8NFW1 1626 aaPredicted RBP7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 PLIN1O60240 522 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 PPP1R11O60927 126 aaPredicted RBP7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 SNRPB2P08579 225 aaKnown RBP7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 FGRP09769 529 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 TRIM27P14373 513 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 HOXC12P31275 282 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 MVPQ14764 893 aaKnown RBP7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 LINC01356Q8N9X3 169 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 CCDC136Q96JN2 1154 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 ZNF408Q9H9D4 720 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 BTG4Q9NY30 223 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 FBLN5Q9UBX5 448 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 LAS1LQ9Y4W2 734 aaKnown RBP7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 PMF1-BGLAPU3KQ54 211 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 CRYBG1Q9Y4K1 1723 aa7.27□□□□□ -1.25
CDKN1B-204ENST00000477087 NTRK1P04629 796 aa7.26□□□□□ -1.25
CDKN1B-204ENST00000477087 ITGAVP06756 1048 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms