RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 USP10Q14694 798 aaKnown RBP6.92□□□□□ -1.3
LTN1-204ENST00000475344 TMEM132BQ14DG7 1078 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 SEC23AQ15436 765 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 ZXDCQ2QGD7 858 aaPredicted RBP6.92□□□□□ -1.3
LTN1-204ENST00000475344 ZNF568Q3ZCX4 644 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 NOSTRINQ8IVI9 506 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 C2orf69Q8N8R5 385 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 BORCS6Q96GS4 357 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 AJUBAQ96IF1 538 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 LRRC37BQ96QE4 947 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 SLC12A8A0AV02 714 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 GPR42O15529 346 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 HIP1RO75146 1068 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 AOAHP28039 575 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 EPHB4P54760 987 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 IL13RA1P78552 427 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 ICAM4Q14773 271 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 TM4SF20Q53R12 229 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 SLFN13Q68D06 897 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 ZNF585AQ6P3V2 769 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 ABHD17CQ6PCB6 329 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 OVCH1Q7RTY7 1134 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 REXO1L1PQ8IX06 675 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 HIPK4Q8NE63 616 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 ERCC4Q92889 916 aaPredicted RBP6.91□□□□□ -1.3
LTN1-204ENST00000475344 CARD11Q9BXL7 1154 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 TRIM39Q9HCM9 518 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 KCNH7Q9NS40 1196 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 GALNT8Q9NY28 637 aa6.91□□□□□ -1.3
LTN1-204ENST00000475344 PRAMEF22A3QJZ6 481 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 ZNF20P17024 532 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 POLD1P28340 1107 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 KCNQ1P51787 676 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 TMEM177Q53S58 311 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 LRSAM1Q6UWE0 723 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 OTOP2Q7RTS6 562 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 DRC1Q96MC2 740 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 GNRHR2Q96P88 292 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 KATNBL1Q9H079 304 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 DEF6Q9H4E7 631 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 BTBD7Q9P203 1132 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 CDC42EP3Q9UKI2 254 aa6.9□□□□□ -1.3
LTN1-204ENST00000475344 PLD2O14939 933 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 FOXP2O15409 715 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 OPA1O60313 960 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 CNOT4O95628 575 aaKnown RBP6.89□□□□□ -1.31
LTN1-204ENST00000475344 KCNA6P17658 529 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 HERVK_113P62684 666 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 IRF9Q00978 393 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 TOP3AQ13472 1001 aaPredicted RBP6.89□□□□□ -1.31
LTN1-204ENST00000475344 PALM2Q8IXS6 379 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 TTC9BQ8N6N2 239 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 SH3TC2Q8TF17 1288 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 ASB15Q8WXK1 588 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 CLUHP3Q96NS8 147 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 GBP4Q96PP9 640 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 LMF1Q96S06 567 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 KRTAP4-11Q9BYQ6 195 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 KRTAP4-2Q9BYR5 136 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 MEGF9Q9H1U4 602 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 KANSL2Q9H9L4 492 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 JAG2Q9Y219 1238 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 SLC4A7Q9Y6M7 1214 aa6.89□□□□□ -1.31
LTN1-204ENST00000475344 M0R2C6 588 aa6.88□□□□□ -1.31
LTN1-204ENST00000475344 CUTAO60888 179 aa6.88□□□□□ -1.31
LTN1-204ENST00000475344 HMGCRP04035 888 aa6.88□□□□□ -1.31
LTN1-204ENST00000475344 ECE1P42892 770 aa6.88□□□□□ -1.31
LTN1-204ENST00000475344 SQSTM1Q13501 440 aa6.88□□□□□ -1.31
LTN1-204ENST00000475344 NOLC1Q14978 699 aaKnown RBP eCLIP6.88□□□□□ -1.31
LTN1-204ENST00000475344 CCDC144BQ3MJ40 725 aa6.88□□□□□ -1.31
LTN1-204ENST00000475344 DDX53Q86TM3 631 aaKnown RBP6.88□□□□□ -1.31
LTN1-204ENST00000475344 GIMAP8Q8ND71 665 aaPredicted RBP6.88□□□□□ -1.31
LTN1-204ENST00000475344 AMNQ9BXJ7 453 aa6.88□□□□□ -1.31
LTN1-204ENST00000475344 SAMD15Q9P1V8 674 aa6.88□□□□□ -1.31
LTN1-204ENST00000475344 RASSF10A6NK89 507 aa6.87□□□□□ -1.31
LTN1-204ENST00000475344 PPP1R12AO14974 1030 aaPredicted RBP6.87□□□□□ -1.31
LTN1-204ENST00000475344 KCNQ2O43526 872 aa6.87□□□□□ -1.31
LTN1-204ENST00000475344 IGFALSP35858 605 aa6.87□□□□□ -1.31
LTN1-204ENST00000475344 CD83Q01151 205 aa6.87□□□□□ -1.31
LTN1-204ENST00000475344 UBXN4Q92575 508 aa6.87□□□□□ -1.31
LTN1-204ENST00000475344 DVL3Q92997 716 aaPredicted RBP6.87□□□□□ -1.31
LTN1-204ENST00000475344 BTBD2Q9BX70 525 aa6.87□□□□□ -1.31
LTN1-204ENST00000475344 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
LTN1-204ENST00000475344 KIAA1683Q9H0B3 1180 aa6.87□□□□□ -1.31
LTN1-204ENST00000475344 GLRX3O76003 335 aaKnown RBP6.86□□□□□ -1.31
LTN1-204ENST00000475344 NPTXRO95502 500 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 MPIG6BO95866 241 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 ETV4P43268 484 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 RNF151Q2KHN1 245 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 ZMAT1Q5H9K5 638 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 WNK4Q96J92 1243 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 BOCQ9BWV1 1114 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 ZDHHC5Q9C0B5 715 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 OR10A5Q9H207 317 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 SEC61A2Q9H9S3 476 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 MYRFQ9Y2G1 1151 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 TCAF1Q9Y4C2 921 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 TNPO3Q9Y5L0 923 aaKnown RBP6.86□□□□□ -1.31
LTN1-204ENST00000475344 B3GALT1Q9Y5Z6 326 aa6.86□□□□□ -1.31
LTN1-204ENST00000475344 B4E1Z4 1266 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms