RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 NME8Q8N427 588 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 FBXL6Q8N531 539 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 PRSS33Q8NF86 280 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 MICAL1Q8TDZ2 1067 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 LINC01599Q8WXQ3 324 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 SNX27Q96L92 541 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 TLE6Q9H808 572 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 AGO3Q9H9G7 860 aaKnown RBP14.45□□□□□ -0.1
SKA3-206ENST00000475251 BAZ2BQ9UIF8 2168 aaKnown RBP14.45□□□□□ -0.1
SKA3-206ENST00000475251 PADI3Q9ULW8 664 aa14.45□□□□□ -0.1
SKA3-206ENST00000475251 IGSF9BQ9UPX0 1349 aa14.44□□□□□ -0.1
SKA3-206ENST00000475251 KIAA1671Q9BY89 1806 aa14.44□□□□□ -0.1
SKA3-206ENST00000475251 SPDYE3A6NKU9 549 aa14.44□□□□□ -0.1
SKA3-206ENST00000475251 ATP9AO75110 1047 aa14.44□□□□□ -0.1
SKA3-206ENST00000475251 INSRRP14616 1297 aa14.44□□□□□ -0.1
SKA3-206ENST00000475251 ATF7P17544 494 aaPredicted RBP14.44□□□□□ -0.1
SKA3-206ENST00000475251 DNAJB1P25685 340 aa14.44□□□□□ -0.1
SKA3-206ENST00000475251 PAN2Q504Q3 1202 aaKnown RBP14.44□□□□□ -0.1
SKA3-206ENST00000475251 PDE12Q6L8Q7 609 aaKnown RBP14.44□□□□□ -0.1
SKA3-206ENST00000475251 RBM23Q86U06 439 aaKnown RBP14.44□□□□□ -0.1
SKA3-206ENST00000475251 PSTPIP2Q9H939 334 aa14.44□□□□□ -0.1
SKA3-206ENST00000475251 JPH1Q9HDC5 661 aaPredicted RBP14.44□□□□□ -0.1
SKA3-206ENST00000475251 BARX2Q9UMQ3 279 aaPredicted RBP14.44□□□□□ -0.1
SKA3-206ENST00000475251 TRPC6Q9Y210 931 aa14.44□□□□□ -0.1
SKA3-206ENST00000475251 USP15Q9Y4E8 981 aaPredicted RBP14.44□□□□□ -0.1
SKA3-206ENST00000475251 PCDHA2Q9Y5H9 948 aa14.44□□□□□ -0.1
SKA3-206ENST00000475251 C5orf42Q9H799 3197 aa14.44□□□□□ -0.1
SKA3-206ENST00000475251 KDM3AQ9Y4C1 1321 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 TECTAO75443 2155 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 ITGB5P18084 799 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 SPOUT1Q5T280 376 aaKnown RBP14.43□□□□□ -0.1
SKA3-206ENST00000475251 NEK1Q96PY6 1258 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 MTA3Q9BTC8 594 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 CELF4Q9BZC1 486 aaKnown RBP14.43□□□□□ -0.1
SKA3-206ENST00000475251 SENP2Q9HC62 589 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 JADE2Q9NQC1 790 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 TLR9Q9NR96 1032 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 C1orf112Q9NSG2 853 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 SLC9A2Q9UBY0 812 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 PCDHB7Q9Y5E2 793 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 UBIAD1Q9Y5Z9 338 aa14.43□□□□□ -0.1
SKA3-206ENST00000475251 SMIM35A0A1B0GVV1 85 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 E7EWF7 191 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 GLP2RO95838 553 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 SARSP49591 514 aaKnown RBP14.42□□□□□ -0.1
SKA3-206ENST00000475251 SLC26A2P50443 739 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 NUBP1P53384 320 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 KRT76Q01546 638 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 IER5LQ5T953 404 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 CASC1Q6TDU7 716 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 PLPPR4Q7Z2D5 763 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 RTN4RL1Q86UN2 441 aaPredicted RBP14.42□□□□□ -0.1
SKA3-206ENST00000475251 ZNF654Q8IZM8 581 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 TMTC2Q8N394 836 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 RPGRIP1Q96KN7 1286 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 SDF4Q9BRK5 362 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 IL25Q9H293 177 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 PKD2L1Q9P0L9 805 aa14.42□□□□□ -0.1
SKA3-206ENST00000475251 PPFIA3O75145 1194 aa14.41□□□□□ -0.1
SKA3-206ENST00000475251 CALM1P0DP23 149 aa14.41□□□□□ -0.1
SKA3-206ENST00000475251 CALM2P0DP24 149 aa14.41□□□□□ -0.1
SKA3-206ENST00000475251 CALM3P0DP25 149 aa14.41□□□□□ -0.1
SKA3-206ENST00000475251 STAT5BP51692 787 aa14.41□□□□□ -0.1
SKA3-206ENST00000475251 TMEM62Q0P6H9 643 aa14.41□□□□□ -0.1
SKA3-206ENST00000475251 NFX1Q12986 1120 aaKnown RBP14.41□□□□□ -0.1
SKA3-206ENST00000475251 TEX2Q8IWB9 1127 aa14.41□□□□□ -0.1
SKA3-206ENST00000475251 IGDCC4Q8TDY8 1250 aa14.41□□□□□ -0.1
SKA3-206ENST00000475251 PHOX2BQ99453 314 aa14.41□□□□□ -0.1
SKA3-206ENST00000475251 NFASCO94856 1347 aa14.41□□□□□ -0.1
SKA3-206ENST00000475251 DENND3A2RUS2 1198 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 CCDC69A6NI79 296 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 FGF18O76093 207 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 TCF15Q12870 199 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 PTPN21Q16825 1174 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 DUSP6Q16828 381 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 NFXL1Q6ZNB6 911 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 ZBTB33Q86T24 672 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 THNSL1Q8IYQ7 743 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 ATP8B4Q8TF62 1192 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 SUSD6Q92537 303 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 PUF60Q9UHX1 559 aaKnown RBP14.4□□□□□ -0.1
SKA3-206ENST00000475251 PCDHA6Q9UN73 950 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 PCDHA8Q9Y5H6 950 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 KMT2EQ8IZD2 1858 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 PLXNA4Q9HCM2 1894 aa14.4□□□□□ -0.1
SKA3-206ENST00000475251 TBKBP1A7MCY6 615 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 GPR182O15218 404 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 GFRA3O60609 400 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 RPS6KA5O75582 802 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 IGHDP01880 384 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 LAG3P18627 525 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 ACTR2P61160 394 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 PLCB4Q15147 1175 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 TMEM184AQ6ZMB5 413 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 SLC24A5Q71RS6 500 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 MB21D2Q8IYB1 491 aaPredicted RBP14.39□□□□□ -0.11
SKA3-206ENST00000475251 ATOH1Q92858 354 aaPredicted RBP14.39□□□□□ -0.11
SKA3-206ENST00000475251 PCYT2Q99447 389 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 MXRA8Q9BRK3 442 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms