RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 BEX3Q00994 111 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 CYP4A11Q02928 519 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 TCHHQ07283 1943 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 E2F4Q16254 413 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 NAALADL2Q58DX5 795 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 UTP14CQ5TAP6 766 aaKnown RBP11.22□□□□□ -0.61
COL8A1-206ENST00000474648 CCSAPQ6IQ19 270 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-206ENST00000474648 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 PLPPR4Q7Z2D5 763 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 KCNK18Q7Z418 384 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 TPH2Q8IWU9 490 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 FMR1NBQ8N0W7 255 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-206ENST00000474648 BANK1Q8NDB2 785 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 ERMNQ8TAM6 284 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 NEK9Q8TD19 979 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 PLIN2Q99541 437 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 C16orf70Q9BSU1 422 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 ZSWIM4Q9H7M6 989 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 XPNPEP3Q9NQH7 507 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 ZNF302Q9NR11 478 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 BLOC1S4Q9NUP1 217 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 TCEAL9Q9UHQ7 104 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 SYNRGQ9UMZ2 1314 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 KIAA1024Q9UPX6 916 aa11.22□□□□□ -0.61
COL8A1-206ENST00000474648 KIAA1217Q5T5P2 1943 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 POLR2DO15514 142 aaKnown RBP11.21□□□□□ -0.61
COL8A1-206ENST00000474648 MSCO60682 206 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 NR1I2O75469 434 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 MYCP01106 439 aaPredicted RBP11.21□□□□□ -0.61
COL8A1-206ENST00000474648 LGALS2P05162 132 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 PLCG1P19174 1290 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 STAT5BP51692 787 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 ZRSR1Q15695 479 aaKnown RBP11.21□□□□□ -0.61
COL8A1-206ENST00000474648 FSCN1Q16658 493 aaKnown RBP11.21□□□□□ -0.61
COL8A1-206ENST00000474648 DGKDQ16760 1214 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 LONRF3Q496Y0 759 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 GNASQ5JWF2 1037 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 RRAGBQ5VZM2 374 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 HAUS3Q68CZ6 603 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 TRIM50Q86XT4 487 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 C4orf19Q8IY42 314 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 PDILTQ8N807 584 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 KAT2BQ92831 832 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 LXNQ9BS40 222 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 MCOLN1Q9GZU1 580 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 SMARCAD1Q9H4L7 1026 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 CCDC39Q9UFE4 941 aa11.21□□□□□ -0.61
COL8A1-206ENST00000474648 EMSYQ7Z589 1322 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 IGSF9BQ9UPX0 1349 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 DDX11L8A8MPP1 907 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 E9PMD0 336 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 BACH1O14867 736 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 ZNF202O95125 648 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 C6orf222P0C671 652 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-206ENST00000474648 XRCC6P12956 609 aaKnown RBP eCLIP11.2□□□□□ -0.62
COL8A1-206ENST00000474648 CST5P28325 142 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-206ENST00000474648 SYKP43405 635 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 CPT1AP50416 773 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 FAM160A1Q05DH4 1040 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 LRRC41Q15345 812 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 PDXDC2PQ6P474 469 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 CCDC73Q6ZRK6 1079 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 ANO5Q75V66 913 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 CALML4Q96GE6 196 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 NACC1Q96RE7 527 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 MTRQ99707 1265 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 MFRPQ9BY79 579 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 RNF208Q9H0X6 261 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 RNPEPQ9H4A4 650 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 DDX19AQ9NUU7 478 aaKnown RBP11.2□□□□□ -0.62
COL8A1-206ENST00000474648 SERTAD1Q9UHV2 236 aa11.2□□□□□ -0.62
COL8A1-206ENST00000474648 KDM3AQ9Y4C1 1321 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 TMEM150BA6NC51 233 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 HAS3O00219 553 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 ACTN4O43707 911 aaKnown RBP11.19□□□□□ -0.62
COL8A1-206ENST00000474648 KPNA6O60684 536 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 MYL3P08590 195 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 SLFN14P0C7P3 912 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 ZNF286BP0CG31 522 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 TXLNAP40222 546 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 PURAQ00577 322 aaKnown RBP11.19□□□□□ -0.62
COL8A1-206ENST00000474648 PLCB4Q15147 1175 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 KCNA10Q16322 511 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 BRDTQ58F21 947 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-206ENST00000474648 XKR3Q5GH77 459 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 FAM160B1Q5W0V3 765 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 SH3RF1Q7Z6J0 888 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 IQUBQ8NA54 791 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 PIGOQ8TEQ8 1089 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 RAD54LQ92698 747 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 GLG1Q92896 1179 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 ATP6V0A1Q93050 837 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 DHX58Q96C10 678 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 DEFB118Q96PH6 123 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 CEP89Q96ST8 783 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 NIFKQ9BYG3 293 aaKnown RBP11.19□□□□□ -0.62
COL8A1-206ENST00000474648 CRISPLD2Q9H0B8 497 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms