RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 ELF2Q15723 593 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 ASTE1Q2TB18 679 aaPredicted RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 SH3D19Q5HYK7 790 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 ZNF569Q5MCW4 686 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 ANGEL2Q5VTE6 544 aaKnown RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 SLC30A10Q6XR72 485 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 RSRC2Q7L4I2 434 aaKnown RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 GPC2Q8N158 579 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 NLGN2Q8NFZ4 835 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 NEK11Q8NG66 645 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 TRPM4Q8TD43 1214 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 PIGOQ8TEQ8 1089 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 TMEM174Q8WUU8 243 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 ATG4CQ96DT6 458 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 KLRG1Q96E93 195 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 PCMTD1Q96MG8 357 aaPredicted RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 PDCD2LQ9BRP1 358 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 LXNQ9BS40 222 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 MKNK1Q9BUB5 465 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 TANGO6Q9C0B7 1094 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 NUCKS1Q9H1E3 243 aaKnown RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 GANQ9H2C0 597 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 MMRN2Q9H8L6 949 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 METTL14Q9HCE5 456 aaKnown RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 PLCB1Q9NQ66 1216 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 KCNH7Q9NS40 1196 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 CDC23Q9UJX2 597 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 DBR1Q9UK59 544 aaKnown RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.82□□□□□ -0.68
USP39-214ENST00000474572 LRRC37A2A6NM11 1700 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 LRRC53A6NM62 1247 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 RBAK-RBAKDNI3L0D1 243 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 ZNF263O14978 683 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 CHMP2AO43633 222 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 PRPF6O94906 941 aaKnown RBP10.81□□□□□ -0.68
USP39-214ENST00000474572 FAM13AO94988 1023 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 GCNT3O95395 438 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 P4HBP07237 508 aaKnown RBP10.81□□□□□ -0.68
USP39-214ENST00000474572 SPP2Q13103 211 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 ERCC6LQ2NKX8 1250 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 HGSNATQ68CP4 663 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 MIER3Q7Z3K6 550 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 TPH2Q8IWU9 490 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 MNS1Q8NEH6 495 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 RDM1Q8NG50 284 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 SMCR8Q8TEV9 937 aaPredicted RBP10.81□□□□□ -0.68
USP39-214ENST00000474572 BORCS6Q96GS4 357 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 TAAR1Q96RJ0 339 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 WRNIP1Q96S55 665 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 NAPGQ99747 312 aaPredicted RBP10.81□□□□□ -0.68
USP39-214ENST00000474572 TIPINQ9BVW5 301 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 ZHX3Q9H4I2 956 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 BCAS3Q9H6U6 928 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 ZSWIM4Q9H7M6 989 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 PARVGQ9HBI0 331 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 PXMP2Q9NR77 195 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 TBC1D22BQ9NU19 505 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 DMAC2Q9NW81 257 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 FBXL5Q9UKA1 691 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 ZNF214Q9UL59 606 aaPredicted RBP10.81□□□□□ -0.68
USP39-214ENST00000474572 KIAA1217Q5T5P2 1943 aa10.81□□□□□ -0.68
USP39-214ENST00000474572 GTPBP10A4D1E9 387 aaKnown RBP10.8□□□□□ -0.68
USP39-214ENST00000474572 CTAGE9A4FU28 777 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 PJA2O43164 708 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 KRT86O43790 486 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 AKAP3O75969 853 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 NR3C1P04150 777 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 RPL13P26373 211 aaKnown RBP10.8□□□□□ -0.68
USP39-214ENST00000474572 HIRAP54198 1017 aaPredicted RBP10.8□□□□□ -0.68
USP39-214ENST00000474572 KCNH2Q12809 1159 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 MTMR1Q13613 665 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 ALCAMQ13740 583 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 MYBPC2Q14324 1141 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 RNF207Q6ZRF8 634 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 CATSPERGQ6ZRH7 1159 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 STXBP4Q6ZWJ1 553 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 ZNF720Q7Z2F6 126 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 SRGAP1Q7Z6B7 1085 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 SLC9A9Q8IVB4 645 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 C4orf19Q8IY42 314 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 CPXCR1Q8N123 301 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 DAW1Q8N136 415 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 CCDC155Q8N6L0 562 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 CEP112Q8N8E3 955 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 EHBP1Q8NDI1 1231 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.8□□□□□ -0.68
USP39-214ENST00000474572 JAKMIP2Q96AA8 810 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 GPRASP2Q96D09 838 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 WNK4Q96J92 1243 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 ZFP91Q96JP5 570 aaPredicted RBP10.8□□□□□ -0.68
USP39-214ENST00000474572 TRERF1Q96PN7 1200 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 SENP7Q9BQF6 1050 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 CCDC94Q9BW85 323 aaPredicted RBP10.8□□□□□ -0.68
USP39-214ENST00000474572 LSM14BQ9BX40 385 aaKnown RBP10.8□□□□□ -0.68
USP39-214ENST00000474572 TSGA10Q9BZW7 698 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 ST6GALNAC4Q9H4F1 302 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 FAM207AQ9NSI2 230 aaPredicted RBP10.8□□□□□ -0.68
USP39-214ENST00000474572 RNF146Q9NTX7 359 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 GGA3Q9NZ52 723 aa10.8□□□□□ -0.68
USP39-214ENST00000474572 PPP1R1BQ9UD71 204 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms