RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 HNRNPABQ99729 332 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 CYP4F12Q9HCS2 524 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 HPF1Q9NWY4 346 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 ADAMTS1Q9UHI8 967 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 EXOC7Q9UPT5 735 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 AXIN2Q9Y2T1 843 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 C15orf41Q9Y2V0 281 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 RTCBQ9Y3I0 505 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 PCDHGA2Q9Y5H1 932 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 HTR3EA5X5Y0 456 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 ALDH1A2O94788 518 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 CYP2A6P11509 494 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 ALADP13716 330 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 SSTR3P32745 418 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 PLOD1Q02809 727 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 TRIM32Q13049 653 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 MAP7Q14244 749 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 PABPC1LQ4VXU2 614 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 PLEKHO1Q53GL0 409 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 KRTCAP3Q53RY4 240 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 NDUFAF5Q5TEU4 345 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 ARHGAP36Q6ZRI8 547 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 C16orf86Q6ZW13 317 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 KRT27Q7Z3Y8 459 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 SLC41A1Q8IVJ1 513 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 CADM3Q8N126 398 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 LRRC71Q8N4P6 559 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 NEK11Q8NG66 645 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 KLHDC4Q8TBB5 520 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 ZFAND2BQ8WV99 257 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 HS6ST2Q96MM7 605 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 ALS2CR12Q96Q35 445 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 NR1H4Q96RI1 486 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 JPH2Q9BR39 696 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 LMAN2LQ9H0V9 348 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 ZNF277Q9NRM2 450 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 DDX20Q9UHI6 824 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 DDX19BQ9UMR2 479 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 PCDHB3Q9Y5E6 796 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 A0A087X0B3 334 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 A0A1B0GVG6 124 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PMM2O15305 246 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CCDC192P0DO97 292 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 NFKBIAP25963 317 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 OR1G1P47890 313 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 GSK3AP49840 483 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SCNN1GP51170 649 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PLCD1P51178 756 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 MAP3K9P80192 1104 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PLCB3Q01970 1234 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PDIA6Q15084 440 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ZNF124Q15973 351 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 LETM2Q2VYF4 491 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 RETSATQ6NUM9 610 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 LRSAM1Q6UWE0 723 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ZNF704Q6ZNC4 412 aaPredicted RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 CLEC17AQ6ZS10 378 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PLEKHM3Q6ZWE6 761 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 HOMER1Q86YM7 354 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SCYL3Q8IZE3 742 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CACTINQ8WUQ7 758 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 DHX58Q96C10 678 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 RMDN3Q96TC7 470 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CGREF1Q99674 301 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 NTMT1Q9BV86 223 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ACPTQ9BZG2 426 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 MROH8Q9H579 483 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 DCTPP1Q9H773 170 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 HMX1Q9NP08 348 aaPredicted RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.8□□□□□ -1.8
UBR3-208ENST00000474426 EHD3Q9NZN3 535 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 FAM153AQ9UHL3 310 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CLEC4AQ9UMR7 237 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CHTOPQ9Y3Y2 248 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 PCDHB6Q9Y5E3 794 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 IBTKQ9P2D0 1353 aaPredicted RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 A0A1B0GUA9 196 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 KIF28PB7ZC32 967 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 GOLGA8MH3BSY2 632 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CCNT1O60563 726 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 TACC1O75410 805 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 FAM13AO94988 1023 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ACTN1P12814 892 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PSMC2P35998 433 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 CETN2P41208 172 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 EXOSC9Q06265 439 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 FMR1Q06787 632 aaKnown RBP eCLIP3.8□□□□□ -1.8
UBR3-208ENST00000474426 CETN1Q12798 172 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 KIF5AQ12840 1032 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 AP3B2Q13367 1082 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 RAB33AQ14088 237 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SCARB2Q14108 478 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CNGA2Q16280 664 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 INSCQ1MX18 579 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SLC30A9Q6PML9 568 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CWC27Q6UX04 472 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 MEX3BQ6ZN04 569 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 C3orf67Q6ZVT6 689 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 KIAA1328Q86T90 577 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms