RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 SAMM50Q9Y512 469 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 PCDHA10Q9Y5I2 948 aa12.17□□□□□ -0.46
RNF220-210ENST00000474394 TRIP12Q14669 1992 aaPredicted RBP12.17□□□□□ -0.46
RNF220-210ENST00000474394 RRN3P2A6NIE6 340 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 WDR64B1ANS9 1081 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 BTBD18B2RXH4 712 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 TREHO43280 583 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 CCNT1O60563 726 aaKnown RBP12.16□□□□□ -0.46
RNF220-210ENST00000474394 PSAPP07602 524 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 CKBP12277 381 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 BMP1P13497 986 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 ADAM17P78536 824 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 GUCY1B3Q02153 619 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 PLCB4Q15147 1175 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 GRIK4Q16099 956 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 TRIM71Q2Q1W2 868 aaKnown RBP12.16□□□□□ -0.46
RNF220-210ENST00000474394 PPP4R3AQ6IN85 833 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 SWSAP1Q6NVH7 229 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 PDXDC2PQ6P474 469 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 LRRC8DQ7L1W4 858 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 DEFB128Q7Z7B8 93 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 TNFRSF25Q93038 417 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 CHD7Q9P2D1 2997 aa12.16□□□□□ -0.46
RNF220-210ENST00000474394 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 SLC37A4O43826 429 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 MARCH6O60337 910 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 HBP1O60381 514 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 CAND2O75155 1236 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 PSMD10O75832 226 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 CD2BP2O95400 341 aaKnown RBP12.15□□□□□ -0.46
RNF220-210ENST00000474394 ACTN1P12814 892 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 INSRRP14616 1297 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 SFNP31947 248 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 THPOP40225 353 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 JAK3P52333 1124 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 EARS2Q5JPH6 523 aaKnown RBP12.15□□□□□ -0.46
RNF220-210ENST00000474394 TMEM31Q5JXX7 168 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 ZNF618Q5T7W0 954 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 TAF2Q6P1X5 1199 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 CCDC60Q8IWA6 550 aaPredicted RBP12.15□□□□□ -0.46
RNF220-210ENST00000474394 FBXO18Q8NFZ0 1043 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 RDM1Q8NG50 284 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 ETNPPLQ8TBG4 499 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 HERVK_113Q902F9 699 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 WNT8BQ93098 351 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 FAM20AQ96MK3 541 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 FTOQ9C0B1 505 aaKnown RBP eCLIP12.15□□□□□ -0.46
RNF220-210ENST00000474394 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
RNF220-210ENST00000474394 PRDM12Q9H4Q4 367 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 EPHX3Q9H6B9 360 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 DISC1Q9NRI5 854 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 TUBE1Q9UJT0 475 aa12.15□□□□□ -0.46
RNF220-210ENST00000474394 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 TBX3O15119 743 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 CHMP2AO43633 222 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 BAG4O95429 457 aaKnown RBP12.14□□□□□ -0.47
RNF220-210ENST00000474394 IGBP1P78318 339 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 GNL2Q13823 731 aaKnown RBP12.14□□□□□ -0.47
RNF220-210ENST00000474394 OTOP2Q7RTS6 562 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 MIER3Q7Z3K6 550 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 RSPH3Q86UC2 560 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 CKAP2LQ8IYA6 745 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 ATP8B4Q8TF62 1192 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 GJA10Q969M2 543 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 FOXP1Q9H334 677 aaPredicted RBP12.14□□□□□ -0.47
RNF220-210ENST00000474394 UNC45AQ9H3U1 944 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 KCNMB3Q9NPA1 279 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 CXXC1Q9P0U4 656 aaPredicted RBP12.14□□□□□ -0.47
RNF220-210ENST00000474394 GABBR1Q9UBS5 961 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 MAFBQ9Y5Q3 323 aaPredicted RBP12.14□□□□□ -0.47
RNF220-210ENST00000474394 TANC1Q9C0D5 1861 aa12.14□□□□□ -0.47
RNF220-210ENST00000474394 MYH9P35579 1960 aaKnown RBP12.13□□□□□ -0.47
RNF220-210ENST00000474394 MBLAC1A4D2B0 266 aaPredicted RBP12.13□□□□□ -0.47
RNF220-210ENST00000474394 RSPH10B2B2RC85 870 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 RPLP2P05387 115 aaKnown RBP12.13□□□□□ -0.47
RNF220-210ENST00000474394 RSPH10BP0C881 870 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 IGFBP4P22692 258 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 ZNF484Q5JVG2 852 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 RASIP1Q5U651 963 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 RPAINQ86UA6 219 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 BBXQ8WY36 941 aaPredicted RBP12.13□□□□□ -0.47
RNF220-210ENST00000474394 VWCEQ96DN2 955 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 FAM167AQ96KS9 214 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.13□□□□□ -0.47
RNF220-210ENST00000474394 MUC6Q6W4X9 2439 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 COL1A2P08123 1366 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 WDFY4Q6ZS81 3184 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 SCN5AQ14524 2016 aa12.13□□□□□ -0.47
RNF220-210ENST00000474394 ZBBXA8MT70 800 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 NBNO60934 754 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 CXCL10P02778 98 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 CTSHP09668 335 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 ATP4AP20648 1035 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 PPP2R5CQ13362 524 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 ADGRE1Q14246 886 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 AAK1Q2M2I8 961 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 MARCH8Q5T0T0 291 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 TRAF7Q6Q0C0 670 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms