RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SMARCAD1Q9H4L7 1026 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 PDGFCQ9NRA1 345 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 ANKEF1Q9NU02 776 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 SRRDQ9UH36 339 aa11.43□□□□□ -0.58
PRPF38A-202ENST00000474048 ZSWIM8A7E2V4 1837 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 RBM47A0AV96 593 aaKnown RBP11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 FOXN1O15353 648 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 ADCY3O60266 1144 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 ZEB2O60315 1214 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 ARIH2O95376 493 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 HMGCRP04035 888 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 OATP04181 439 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 XRCC6P12956 609 aaKnown RBP eCLIP11.42□□□□□ -0.588e-6■□□□□ 10.2
PRPF38A-202ENST00000474048 STAT5BP51692 787 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 SP2Q02086 613 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 DPYDQ12882 1025 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 CUL4BQ13620 913 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 CCL14Q16627 93 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 DGKDQ16760 1214 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 TPD52L1Q16890 204 aaPredicted RBP11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 ANO6Q4KMQ2 910 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 NAALADL2Q58DX5 795 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 XKR3Q5GH77 459 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 ISM2Q6H9L7 571 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 TAPT1Q6NXT6 567 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 B3GNT9Q6UX72 402 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 ABHD15Q6UXT9 468 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 SH3RF1Q7Z6J0 888 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 TLK2Q86UE8 772 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 SYT2Q8N9I0 419 aaPredicted RBP11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 PPTC7Q8NI37 304 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 DDX12PQ92771 950 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 CEP170P1Q96L14 293 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 C7orf25Q9BPX7 421 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 TIPINQ9BVW5 301 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 BLOC1S4Q9NUP1 217 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 DBR1Q9UK59 544 aaKnown RBP11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 GJD2Q9UKL4 321 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 GABRQQ9UN88 632 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 TRPC6Q9Y210 931 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 COL4A3BPQ9Y5P4 624 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 DOCK3Q8IZD9 2030 aa11.42□□□□□ -0.58
PRPF38A-202ENST00000474048 EMSYQ7Z589 1322 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 IGSF9BQ9UPX0 1349 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 PVALEFA0A1B0GWK0 134 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 USO1O60763 962 aaKnown RBP11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 LYPLA2O95372 231 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 RARBP10826 455 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 GAP43P17677 238 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 POLGP54098 1239 aaPredicted RBP11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 RAD51AP2Q09MP3 1159 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 KCNB1Q14721 858 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 ECM1Q16610 540 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 CCDC62Q6P9F0 684 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 UNC13DQ70J99 1090 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 CCDC60Q8IWA6 550 aaPredicted RBP11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 MLKLQ8NB16 471 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 SLAIN1Q8ND83 568 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 ZNF296Q8WUU4 475 aaPredicted RBP11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 SLC7A3Q8WY07 619 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 EMID1Q96A84 441 aaPredicted RBP11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 DRC1Q96MC2 740 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 GPR20Q99678 358 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 JPH2Q9BR39 696 aaPredicted RBP11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 PANK4Q9NVE7 773 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 ERAP1Q9NZ08 941 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 TUBE1Q9UJT0 475 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 MAN1B1Q9UKM7 699 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 ODF2LQ9ULJ1 636 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 TRIM17Q9Y577 477 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 WDR81Q562E7 1941 aa11.41□□□□□ -0.58
PRPF38A-202ENST00000474048 MYMKA6NI61 221 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 SMTNL1A8MU46 457 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 PSMA7O14818 248 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 DYNC1LI2O43237 492 aaPredicted RBP11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 ATG7O95352 703 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 SMPD1P17405 629 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 CYP11B2P19099 503 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 CASP1P29466 404 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 ZNF165P49910 485 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 SLC12A3P55017 1021 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 PSMC6P62333 389 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 MDM2Q00987 491 aaPredicted RBP11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 ARHGAP1Q07960 439 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 PSMD2Q13200 908 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 UGCGQ16739 394 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 HSDL1Q3SXM5 330 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 MTERF2Q49AM1 385 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 KMT5BQ4FZB7 885 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 HERC4Q5GLZ8 1057 aaPredicted RBP11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 PRAMEF19Q5SWL8 479 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 NT5DC1Q5TFE4 455 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 ZNF658Q5TYW1 1059 aaPredicted RBP11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 PADI6Q6TGC4 694 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 PLPPR4Q7Z2D5 763 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 KCNK18Q7Z418 384 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 MCPH1Q8NEM0 835 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 FAM200AQ8TCP9 573 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 AFAP1L1Q8TED9 768 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms