RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 ZIM2Q9NZV7 527 aa8.34□□□□□ -1.07
SEC22A-204ENST00000473494 MSRAQ9UJ68 235 aa8.34□□□□□ -1.07
SEC22A-204ENST00000473494 NOC2LQ9Y3T9 749 aaKnown RBP8.34□□□□□ -1.07
SEC22A-204ENST00000473494 OAS3Q9Y6K5 1087 aaKnown RBP8.34□□□□□ -1.07
SEC22A-204ENST00000473494 LCHNA4D1U4 455 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 LRG1P02750 347 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 PDE6BP35913 854 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 DBPQ10586 325 aaPredicted RBP8.33□□□□□ -1.08
SEC22A-204ENST00000473494 CXorf67Q86X51 503 aaPredicted RBP8.33□□□□□ -1.08
SEC22A-204ENST00000473494 CILP2Q8IUL8 1156 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 PHYKPLQ8IUZ5 450 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 C7orf31Q8N865 590 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 ALG3Q92685 438 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 RELTQ969Z4 430 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 E2F7Q96AV8 911 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 TOE1Q96GM8 510 aaKnown RBP8.33□□□□□ -1.08
SEC22A-204ENST00000473494 AASDHPPTQ9NRN7 309 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 CCM2LQ9NUG4 571 aaPredicted RBP8.33□□□□□ -1.08
SEC22A-204ENST00000473494 FAN1Q9Y2M0 1017 aa8.33□□□□□ -1.08
SEC22A-204ENST00000473494 UBA6A0AVT1 1052 aaPredicted RBP8.32□□□□□ -1.08
SEC22A-204ENST00000473494 CFBP00751 764 aa8.32□□□□□ -1.08
SEC22A-204ENST00000473494 PRLP01236 227 aa8.32□□□□□ -1.08
SEC22A-204ENST00000473494 THBS2P35442 1172 aa8.32□□□□□ -1.08
SEC22A-204ENST00000473494 MANFP55145 182 aaKnown RBP8.32□□□□□ -1.08
SEC22A-204ENST00000473494 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
SEC22A-204ENST00000473494 NOL8Q76FK4 1167 aaKnown RBP8.32□□□□□ -1.08
SEC22A-204ENST00000473494 PROSER1Q86XN7 944 aa8.32□□□□□ -1.08
SEC22A-204ENST00000473494 CMIPQ8IY22 773 aa8.32□□□□□ -1.08
SEC22A-204ENST00000473494 ZNF496Q96IT1 587 aaPredicted RBP8.32□□□□□ -1.08
SEC22A-204ENST00000473494 FOXB1Q99853 325 aa8.32□□□□□ -1.08
SEC22A-204ENST00000473494 TCF7L1Q9HCS4 588 aa8.32□□□□□ -1.08
SEC22A-204ENST00000473494 ZFP64Q9NPA5 681 aa8.32□□□□□ -1.08
SEC22A-204ENST00000473494 GOLGA6L22H0YM25 854 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 BIN1O00499 593 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 PAPLNO95428 1278 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 MPIG6BO95866 241 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 ITGB5P18084 799 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 GPR3P46089 330 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 LRRC41Q15345 812 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 KCNMB1Q16558 191 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 TMC6Q7Z403 805 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 CPA5Q8WXQ8 436 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 C8orf48Q96LL4 319 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 RHOBTB2Q9BYZ6 727 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 NGRNQ9NPE2 291 aaKnown RBP8.31□□□□□ -1.08
SEC22A-204ENST00000473494 PLA2G2DQ9UNK4 145 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 PPP2R3BQ9Y5P8 575 aa8.31□□□□□ -1.08
SEC22A-204ENST00000473494 ZNF839A8K0R7 811 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.3□□□□□ -1.08
SEC22A-204ENST00000473494 H2AFYO75367 372 aaKnown RBP8.3□□□□□ -1.08
SEC22A-204ENST00000473494 RFPL1O75677 317 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 ENPP1P22413 925 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 MC4RP32245 332 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 SCAND1P57086 179 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 ZNF200P98182 395 aaPredicted RBP8.3□□□□□ -1.08
SEC22A-204ENST00000473494 ALDH6A1Q02252 535 aaKnown RBP8.3□□□□□ -1.08
SEC22A-204ENST00000473494 FSCN1Q16658 493 aaKnown RBP8.3□□□□□ -1.08
SEC22A-204ENST00000473494 CR1LQ2VPA4 569 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 TTC38Q5R3I4 469 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 ESPNLQ6ZVH7 1005 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 HIPK4Q8NE63 616 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 TSR2Q969E8 191 aaKnown RBP8.3□□□□□ -1.08
SEC22A-204ENST00000473494 FAXDC2Q96IV6 333 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 RNF38Q9H0F5 515 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 WNT8AQ9H1J5 351 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 SEMA4AQ9H3S1 761 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 BCAS3Q9H6U6 928 aa8.3□□□□□ -1.08
SEC22A-204ENST00000473494 LUC7LQ9NQ29 371 aaKnown RBP8.3□□□□□ -1.08
SEC22A-204ENST00000473494 GOLGA8AA7E2F4 631 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 GOLGA8BA8MQT2 603 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 ASGR2P07307 311 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 PTGS1P23219 599 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 VIPR1P32241 457 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 STAT5AP42229 794 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 MYBPC3Q14896 1274 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 PCBP2Q15366 365 aaKnown RBP eCLIP8.29□□□□□ -1.08
SEC22A-204ENST00000473494 ZBTB41Q5SVQ8 909 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 NXNQ6DKJ4 435 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 SSH1Q8WYL5 1049 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 MAML3Q96JK9 1138 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 POFUT1Q9H488 388 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 ZNF552Q9H707 407 aaPredicted RBP8.29□□□□□ -1.08
SEC22A-204ENST00000473494 MKS1Q9NXB0 559 aa8.29□□□□□ -1.08
SEC22A-204ENST00000473494 LUC7L2Q9Y383 392 aaKnown RBP8.29□□□□□ -1.08
SEC22A-204ENST00000473494 RECQLP46063 649 aaPredicted RBP8.28□□□□□ -1.08
SEC22A-204ENST00000473494 ZC3H18Q86VM9 953 aaKnown RBP8.28□□□□□ -1.08
SEC22A-204ENST00000473494 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
SEC22A-204ENST00000473494 CHPFQ8IZ52 775 aa8.28□□□□□ -1.08
SEC22A-204ENST00000473494 ERCC4Q92889 916 aaPredicted RBP8.28□□□□□ -1.08
SEC22A-204ENST00000473494 ARHGAP28Q9P2N2 729 aa8.28□□□□□ -1.08
SEC22A-204ENST00000473494 ZNF180Q9UJW8 692 aa8.28□□□□□ -1.08
SEC22A-204ENST00000473494 IRS2Q9Y4H2 1338 aa8.28□□□□□ -1.08
SEC22A-204ENST00000473494 PRAMEF22A3QJZ6 481 aa8.27□□□□□ -1.09
SEC22A-204ENST00000473494 ELL2O00472 640 aaPredicted RBP8.27□□□□□ -1.09
SEC22A-204ENST00000473494 PCDHGA12O60330 932 aa8.27□□□□□ -1.09
SEC22A-204ENST00000473494 SNUPNO95149 360 aaKnown RBP8.27□□□□□ -1.09
SEC22A-204ENST00000473494 C8BP07358 591 aa8.27□□□□□ -1.09
SEC22A-204ENST00000473494 NKX3-2P78367 333 aa8.27□□□□□ -1.09
SEC22A-204ENST00000473494 ROM1Q03395 351 aa8.27□□□□□ -1.09
SEC22A-204ENST00000473494 CACNB2Q08289 660 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms