RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 AMPD3Q01432 767 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 PRAMEF18Q5VWM3 479 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 ESRP1Q6NXG1 681 aaKnown RBP7.98□□□□□ -1.13
CLK1-209ENST00000472679 LHFPL2Q6ZUX7 228 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 SAPCD2Q86UD0 394 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 EFHBQ8N7U6 833 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 TTLL6Q8N841 843 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 IGDCC4Q8TDY8 1250 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 ERCC4Q92889 916 aaPredicted RBP7.98□□□□□ -1.13
CLK1-209ENST00000472679 FOXRED1Q96CU9 486 aaPredicted RBP7.98□□□□□ -1.13
CLK1-209ENST00000472679 GPATCH3Q96I76 525 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 DLL4Q9NR61 685 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 TOMM22Q9NS69 142 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 A0A1B0GTL3 188 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 GOLGA6L22H0YM25 854 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 NUAK1O60285 661 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 AFF3P51826 1226 aaKnown RBP7.97□□□□□ -1.13
CLK1-209ENST00000472679 LRSAM1Q6UWE0 723 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 RTN4RL1Q86UN2 441 aaPredicted RBP7.97□□□□□ -1.13
CLK1-209ENST00000472679 HIPK4Q8NE63 616 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 C16orf92Q96LL3 132 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 CLIC6Q96NY7 704 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 AMNQ9BXJ7 453 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 MS4A5Q9H3V2 200 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 ZMAT4Q9H898 229 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 EMC7Q9NPA0 242 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 ARHGAP20Q9P2F6 1191 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 ZFP69BQ9UJL9 534 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 CROTQ9UKG9 612 aa7.97□□□□□ -1.13
CLK1-209ENST00000472679 CYP17A1P05093 508 aa7.96□□□□□ -1.14
CLK1-209ENST00000472679 CFPP27918 469 aa7.96□□□□□ -1.14
CLK1-209ENST00000472679 MLLT6P55198 1093 aaPredicted RBP7.96□□□□□ -1.14
CLK1-209ENST00000472679 PRR31Q5SQ13 230 aa7.96□□□□□ -1.14
CLK1-209ENST00000472679 STPG3Q8N7X2 389 aa7.96□□□□□ -1.14
CLK1-209ENST00000472679 TP53I13Q8NBR0 393 aaPredicted RBP7.96□□□□□ -1.14
CLK1-209ENST00000472679 TTC1Q99614 292 aa7.96□□□□□ -1.14
CLK1-209ENST00000472679 TACO1Q9BSH4 297 aaKnown RBP7.96□□□□□ -1.14
CLK1-209ENST00000472679 KRTAP4-8Q9BYQ9 185 aa7.96□□□□□ -1.14
CLK1-209ENST00000472679 IFT22Q9H7X7 185 aa7.96□□□□□ -1.14
CLK1-209ENST00000472679 INCENPQ9NQS7 918 aa7.96□□□□□ -1.14
CLK1-209ENST00000472679 ASB1Q9Y576 335 aa7.96□□□□□ -1.14
CLK1-209ENST00000472679 LCHNA4D1U4 455 aa7.95□□□□□ -1.14
CLK1-209ENST00000472679 FNTBP49356 437 aa7.95□□□□□ -1.14
CLK1-209ENST00000472679 SMAD3P84022 425 aaKnown RBP7.95□□□□□ -1.14
CLK1-209ENST00000472679 STAT4Q14765 748 aa7.95□□□□□ -1.14
CLK1-209ENST00000472679 SMAD2Q15796 467 aaKnown RBP7.95□□□□□ -1.14
CLK1-209ENST00000472679 ATP13A4Q4VNC1 1196 aa7.95□□□□□ -1.14
CLK1-209ENST00000472679 DDX42Q86XP3 938 aaKnown RBP eCLIP7.95□□□□□ -1.14
CLK1-209ENST00000472679 C1QL4Q86Z23 238 aa7.95□□□□□ -1.14
CLK1-209ENST00000472679 COL4A3BPQ9Y5P4 624 aa7.95□□□□□ -1.14
CLK1-209ENST00000472679 ZEB2O60315 1214 aa7.94□□□□□ -1.14
CLK1-209ENST00000472679 COL6A1P12109 1028 aa7.94□□□□□ -1.14
CLK1-209ENST00000472679 CAP1Q01518 475 aa7.94□□□□□ -1.14
CLK1-209ENST00000472679 OCRLQ01968 901 aa7.94□□□□□ -1.14
CLK1-209ENST00000472679 CIAPIN1Q6FI81 312 aa7.94□□□□□ -1.14
CLK1-209ENST00000472679 LRRC56Q8IYG6 542 aaPredicted RBP7.94□□□□□ -1.14
CLK1-209ENST00000472679 RTF1Q92541 710 aaKnown RBP7.94□□□□□ -1.14
CLK1-209ENST00000472679 PCDH12Q9NPG4 1184 aa7.94□□□□□ -1.14
CLK1-209ENST00000472679 KCND1Q9NSA2 647 aa7.94□□□□□ -1.14
CLK1-209ENST00000472679 GALNT8Q9NY28 637 aa7.94□□□□□ -1.14
CLK1-209ENST00000472679 SH3D21A4FU49 640 aa7.93□□□□□ -1.14
CLK1-209ENST00000472679 DBX1A6NMT0 343 aa7.93□□□□□ -1.14
CLK1-209ENST00000472679 DDX3XO00571 662 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLK1-209ENST00000472679 RPL13P26373 211 aaKnown RBP7.93□□□□□ -1.14
CLK1-209ENST00000472679 EPHA7Q15375 998 aa7.93□□□□□ -1.14
CLK1-209ENST00000472679 PTPROQ16827 1216 aa7.93□□□□□ -1.14
CLK1-209ENST00000472679 C11orf74Q86VG3 221 aa7.93□□□□□ -1.14
CLK1-209ENST00000472679 ATL2Q8NHH9 583 aa7.93□□□□□ -1.14
CLK1-209ENST00000472679 ZCCHC14Q8WYQ9 949 aaKnown RBP7.93□□□□□ -1.14
CLK1-209ENST00000472679 ATP8A1Q9Y2Q0 1164 aa7.93□□□□□ -1.14
CLK1-209ENST00000472679 FBXO21O94952 628 aa7.92□□□□□ -1.14
CLK1-209ENST00000472679 IL13P35225 146 aa7.92□□□□□ -1.14
CLK1-209ENST00000472679 ECE1P42892 770 aa7.92□□□□□ -1.14
CLK1-209ENST00000472679 IL13RA1P78552 427 aa7.92□□□□□ -1.14
CLK1-209ENST00000472679 TERF2Q15554 542 aa7.92□□□□□ -1.14
CLK1-209ENST00000472679 BROXQ5VW32 411 aa7.92□□□□□ -1.14
CLK1-209ENST00000472679 PASD1Q8IV76 773 aa7.92□□□□□ -1.14
CLK1-209ENST00000472679 SLC5A5Q92911 643 aa7.92□□□□□ -1.14
CLK1-209ENST00000472679 SEMA4AQ9H3S1 761 aa7.92□□□□□ -1.14
CLK1-209ENST00000472679 APOBEC2Q9Y235 224 aaKnown RBP7.92□□□□□ -1.14
CLK1-209ENST00000472679 BRINP1O60477 761 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 KNG1P01042 644 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 ZNF28P17035 718 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 CDKN1CP49918 316 aaPredicted RBP7.91□□□□□ -1.14
CLK1-209ENST00000472679 TMPRSS15P98073 1019 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 ALDH6A1Q02252 535 aaKnown RBP7.91□□□□□ -1.14
CLK1-209ENST00000472679 DDB1Q16531 1140 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 TCERG1LQ5VWI1 586 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 TTLL7Q6ZT98 887 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 LINC01356Q8N9X3 169 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 WDR66Q8TBY9 1149 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 TOX2Q96NM4 488 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 WRNIP1Q96S55 665 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 NTMQ9P121 344 aa7.91□□□□□ -1.14
CLK1-209ENST00000472679 UBA6A0AVT1 1052 aaPredicted RBP7.9□□□□□ -1.14
CLK1-209ENST00000472679 GPR39O43194 453 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 PRLP01236 227 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 SARSP49591 514 aaKnown RBP7.9□□□□□ -1.14
CLK1-209ENST00000472679 RGS3P49796 1198 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 EVA1CP58658 441 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms