RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 FOSL2P15408 326 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 MCM2P49736 904 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 RABGGTBP53611 331 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 MRPS9P82933 396 aaKnown RBP10.45□□□□□ -0.74
SMC4-213ENST00000472282 GPNMBQ14956 572 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 BRDTQ58F21 947 aaPredicted RBP10.45□□□□□ -0.74
SMC4-213ENST00000472282 VSIG10LQ86VR7 867 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 USP38Q8NB14 1042 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 NSUN7Q8NE18 718 aaKnown RBP10.45□□□□□ -0.74
SMC4-213ENST00000472282 MAFAQ8NHW3 353 aaPredicted RBP10.45□□□□□ -0.74
SMC4-213ENST00000472282 DHX38Q92620 1227 aaKnown RBP10.45□□□□□ -0.74
SMC4-213ENST00000472282 AIFM3Q96NN9 605 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 NKX2-4Q9H2Z4 354 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 BARHL2Q9NY43 387 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 CDH23Q9H251 3354 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 FRMPD4Q14CM0 1322 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 GCOM1H8Y6P7 765 aaPredicted RBP10.44□□□□□ -0.74
SMC4-213ENST00000472282 HAS3O00219 553 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 IQCF3P0C7M6 154 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 SUPT20HL2P0C7V6 817 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 POLR2MP0CAP2 368 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 UBA1P22314 1058 aaKnown RBP10.44□□□□□ -0.74
SMC4-213ENST00000472282 ZNF200P98182 395 aaPredicted RBP10.44□□□□□ -0.74
SMC4-213ENST00000472282 PTPN11Q06124 597 aaPredicted RBP10.44□□□□□ -0.74
SMC4-213ENST00000472282 SEMA3FQ13275 785 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 PTGISQ16647 500 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 UBE2SQ16763 222 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 TCTN1Q2MV58 587 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 HSDL1Q3SXM5 330 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 MYSM1Q5VVJ2 828 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 USP17L6PQ6QN14 398 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMC4-213ENST00000472282 CCDC148Q8NFR7 591 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 SMARCC2Q8TAQ2 1214 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 CUL5Q93034 780 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 WNT8BQ93098 351 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 TMX3Q96JJ7 454 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 ALG1Q9BT22 464 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 MAP3K20Q9NYL2 800 aaKnown RBP10.44□□□□□ -0.74
SMC4-213ENST00000472282 VPS54Q9P1Q0 977 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
SMC4-213ENST00000472282 HDAC6Q9UBN7 1215 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 MYH15Q9Y2K3 1946 aa10.44□□□□□ -0.74
SMC4-213ENST00000472282 SMCO2A6NFE2 343 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 ZBBXA8MT70 800 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 MEIS2O14770 477 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 GGPS1O95749 300 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 F2P00734 622 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 HOXD8P13378 290 aaPredicted RBP10.43□□□□□ -0.74
SMC4-213ENST00000472282 FDPSP14324 419 aaKnown RBP10.43□□□□□ -0.74
SMC4-213ENST00000472282 ADCY7P51828 1080 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 LAMC2Q13753 1193 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 ADGRE1Q14246 886 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 DGKDQ16760 1214 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 CELF3Q5SZQ8 465 aaKnown RBP10.43□□□□□ -0.74
SMC4-213ENST00000472282 SESTD1Q86VW0 696 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 DHX37Q8IY37 1157 aaKnown RBP10.43□□□□□ -0.74
SMC4-213ENST00000472282 SAMD3Q8N6K7 520 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 PPTC7Q8NI37 304 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 CCDC12Q8WUD4 166 aaPredicted RBP10.43□□□□□ -0.74
SMC4-213ENST00000472282 MRGPRX2Q96LB1 330 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 PRDM12Q9H4Q4 367 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 PSTPIP2Q9H939 334 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 RIC8AQ9NPQ8 531 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 RTEL1Q9NZ71 1219 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 GMPR2Q9P2T1 348 aaKnown RBP10.43□□□□□ -0.74
SMC4-213ENST00000472282 GTF2IRD1Q9UHL9 959 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 DACH1Q9UI36 760 aa10.43□□□□□ -0.74
SMC4-213ENST00000472282 NLRC5Q86WI3 1866 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 ESYT2A0FGR8 921 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 PIK3CDO00329 1044 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 ARHGEF15O94989 841 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 CCND2P30279 289 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 WNT7BP56706 349 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 KIAA0753Q2KHM9 967 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 RPUSD2Q8IZ73 545 aaKnown RBP10.42□□□□□ -0.74
SMC4-213ENST00000472282 LLPHQ9BRT6 129 aaKnown RBP10.42□□□□□ -0.74
SMC4-213ENST00000472282 C16orf70Q9BSU1 422 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 COL25A1Q9BXS0 654 aaPredicted RBP10.42□□□□□ -0.74
SMC4-213ENST00000472282 ZMYND12Q9H0C1 365 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 PRDM6Q9NQX0 595 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 SH3GLB2Q9NR46 395 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 NOD1Q9Y239 953 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 SLC4A7Q9Y6M7 1214 aa10.42□□□□□ -0.74
SMC4-213ENST00000472282 ATG2AQ2TAZ0 1938 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 SPDYE3A6NKU9 549 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 ADAMTS3O15072 1205 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 NBNO60934 754 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 PFKMP08237 780 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 NLRP5P59047 1200 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 HMGN5P82970 282 aaKnown RBP10.41□□□□□ -0.74
SMC4-213ENST00000472282 BFSP2Q13515 415 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 RAB30Q15771 203 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 TRIM71Q2Q1W2 868 aaKnown RBP10.41□□□□□ -0.74
SMC4-213ENST00000472282 SPRED2Q7Z698 418 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 TMCO2Q7Z6W1 182 aaPredicted RBP10.41□□□□□ -0.74
SMC4-213ENST00000472282 RETREG2Q8NC44 543 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 RASGRP4Q8TDF6 673 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 WASF1Q92558 559 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 PGBD1Q96JS3 809 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms