RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PLXNA4Q9HCM2 1894 aa7.94□□□□□ -1.14
HDAC1-204ENST00000471488 HIDE1A8MVS5 230 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 ZBTB5O15062 677 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 PPP1R11O60927 126 aaPredicted RBP7.93□□□□□ -1.14
HDAC1-204ENST00000471488 FGRP09769 529 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 FGFR1P11362 822 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 HOXC8P31273 242 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 NUBP1P53384 320 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 TPRNQ4KMQ1 711 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 CCDC178Q5BJE1 867 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 SPECC1Q5M775 1068 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 FAM102BQ5T8I3 360 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 KANK3Q6NY19 840 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 SYCE2Q6PIF2 218 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 RTN4RL1Q86UN2 441 aaPredicted RBP7.93□□□□□ -1.14
HDAC1-204ENST00000471488 NLRX1Q86UT6 975 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 C12orf76Q8N812 135 aaPredicted RBP7.93□□□□□ -1.14
HDAC1-204ENST00000471488 ENAHQ8N8S7 591 aaPredicted RBP7.93□□□□□ -1.14
HDAC1-204ENST00000471488 COLGALT1Q8NBJ5 622 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 TRAPPC12Q8WVT3 735 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 CNTNAP3BQ96NU0 1288 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 PIGSQ96S52 555 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 CNTNAP3Q9BZ76 1288 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 MAF1Q9H063 256 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 TYW1Q9NV66 732 aaKnown RBP7.93□□□□□ -1.14
HDAC1-204ENST00000471488 ERAP1Q9NZ08 941 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 TRPV2Q9Y5S1 764 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 R4GN57 208 aa7.93□□□□□ -1.14
HDAC1-204ENST00000471488 DMDP11532 3685 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 FSD2A1L4K1 749 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 SPATA31C2B4DYI2 1134 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 PI15O43692 258 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 ADAM17P78536 824 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 MRPS9P82933 396 aaKnown RBP7.92□□□□□ -1.14
HDAC1-204ENST00000471488 KRT17Q04695 432 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 UBE3AQ05086 875 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 SEMA3FQ13275 785 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 ANKRD45Q5TZF3 282 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 TRMT1LQ7Z2T5 733 aaKnown RBP7.92□□□□□ -1.14
HDAC1-204ENST00000471488 SIX5Q8N196 739 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 CYP2W1Q8TAV3 490 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 ATP8B4Q8TF62 1192 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 CASP10Q92851 521 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 CUL5Q93034 780 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 ADAM2Q99965 735 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 S1PR5Q9H228 398 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 AZI2Q9H6S1 392 aa7.92□□□□□ -1.14
HDAC1-204ENST00000471488 KAT6AQ92794 2004 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 RPS6KA5O75582 802 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 LMNAP02545 664 aaKnown RBP7.91□□□□□ -1.14
HDAC1-204ENST00000471488 ARP10275 920 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 PCP11498 1178 aaKnown RBP7.91□□□□□ -1.14
HDAC1-204ENST00000471488 INSRRP14616 1297 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 LAG3P18627 525 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 KCNA4P22459 653 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 SARSP49591 514 aaKnown RBP7.91□□□□□ -1.14
HDAC1-204ENST00000471488 MFAP1P55081 439 aaKnown RBP7.91□□□□□ -1.14
HDAC1-204ENST00000471488 KRT76Q01546 638 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 TRAF1Q13077 416 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 PDE12Q6L8Q7 609 aaKnown RBP7.91□□□□□ -1.14
HDAC1-204ENST00000471488 ABI1Q8IZP0 508 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 GIMAP8Q8ND71 665 aaPredicted RBP7.91□□□□□ -1.14
HDAC1-204ENST00000471488 SEPT1Q8WYJ6 367 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 MRPS27Q92552 414 aaKnown RBP7.91□□□□□ -1.14
HDAC1-204ENST00000471488 INPP4AQ96PE3 977 aaPredicted RBP7.91□□□□□ -1.14
HDAC1-204ENST00000471488 CELF4Q9BZC1 486 aaKnown RBP7.91□□□□□ -1.14
HDAC1-204ENST00000471488 SMARCAD1Q9H4L7 1026 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 ATP6V0A4Q9HBG4 840 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 MAP3K20Q9NYL2 800 aaKnown RBP7.91□□□□□ -1.14
HDAC1-204ENST00000471488 ZSWIM5Q9P217 1185 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 RCAN3Q9UKA8 241 aa7.91□□□□□ -1.14
HDAC1-204ENST00000471488 VPS13AQ96RL7 3174 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.9□□□□□ -1.14
HDAC1-204ENST00000471488 RRN3P2A6NIE6 340 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 MGEA5O60502 916 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 ATP9AO75110 1047 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 STAM2O75886 525 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 CFHP08603 1231 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 MYBP10242 640 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 HOXB8P17481 243 aaPredicted RBP7.9□□□□□ -1.14
HDAC1-204ENST00000471488 PDE4AP27815 886 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 MTHFRP42898 656 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 CLCN5P51795 746 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 ITIH3Q06033 890 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 PUM1Q14671 1186 aaKnown RBP eCLIP7.9□□□□□ -1.143e-8■■■■□ 20.2
HDAC1-204ENST00000471488 SMC1AQ14683 1233 aaKnown RBP7.9□□□□□ -1.14
HDAC1-204ENST00000471488 PLCB4Q15147 1175 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 IMMTQ16891 758 aaKnown RBP7.9□□□□□ -1.14
HDAC1-204ENST00000471488 ATAT1Q5SQI0 421 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 MARCH8Q5T0T0 291 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 CWF19L1Q69YN2 538 aaKnown RBP7.9□□□□□ -1.14
HDAC1-204ENST00000471488 USP17L6PQ6QN14 398 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 CWC27Q6UX04 472 aaKnown RBP7.9□□□□□ -1.14
HDAC1-204ENST00000471488 TMC5Q6UXY8 1006 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 DCLK2Q8N568 766 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 DTWD2Q8NBA8 298 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 AUTS2Q8WXX7 1259 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 ACSF2Q96CM8 615 aaPredicted RBP7.9□□□□□ -1.14
HDAC1-204ENST00000471488 ZNF558Q96NG5 402 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 NECTIN4Q96NY8 510 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms