RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 KRT13P13646 458 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 USP11P51784 963 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 PPP2R5BQ15173 497 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 PDCD2Q16342 344 aaPredicted RBP10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 CNBD1Q8NA66 436 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 GLIS3Q8NEA6 775 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 B4GALNT2Q8NHY0 566 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 GLG1Q92896 1179 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 DCAF5Q96JK2 942 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 PBKQ96KB5 322 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 DDX23Q9BUQ8 820 aaKnown RBP10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 FAM114A2Q9NRY5 505 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 NKX1-2Q9UD57 310 aaPredicted RBP10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 A6NHS1 94 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 RTN3O95197 1032 aaPredicted RBP10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 GBP1P32455 592 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 PMS2P54278 862 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 KCNMA1Q12791 1236 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 SEPT2Q15019 361 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 UBAP2Q5T6F2 1119 aaKnown RBP10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 TMEM154Q6P9G4 183 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 HEATR3Q7Z4Q2 680 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 CENPTQ96BT3 561 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 ATRNO75882 1429 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 RIC1Q4ADV7 1423 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 MYL1P05976 194 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 GNAT2P19087 354 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 FGFR4P22455 802 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 MMP13P45452 471 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 RCAN1P53805 252 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 AMPD3Q01432 767 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 PPP1R15BQ5SWA1 713 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 ITFG2Q969R8 447 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 CDK5RAP3Q96JB5 506 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 RPS6KC1Q96S38 1066 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 TSG101Q99816 390 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 KCNMB3Q9NPA1 279 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 DLGAP2Q9P1A6 1054 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 CEP72Q9P209 647 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 NR2E1Q9Y466 385 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 MYH7P12883 1935 aa10.36□□□□□ -0.75
NHLRC3-203ENST00000470258 ALADP13716 330 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 CALML3P27482 149 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 ZNF131P52739 623 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 ROR2Q01974 943 aaKnown RBP10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 ANO7Q6IWH7 933 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 MFN1Q8IWA4 741 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 NELFCDQ8IXH7 590 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 ADAM7Q9H2U9 754 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 FBXO3Q9UK99 471 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 CCDC188H7C350 402 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 CCNT1O60563 726 aaKnown RBP10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 CALM1P0DP23 149 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 CALM2P0DP24 149 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 CALM3P0DP25 149 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 RFC5P40937 340 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 RNF220Q5VTB9 566 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 CENPPQ6IPU0 288 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 ACTRT1Q8TDG2 376 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 EZH1Q92800 747 aaPredicted RBP10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 MYH1P12882 1939 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 TNS3Q68CZ2 1445 aa10.35□□□□□ -0.75
NHLRC3-203ENST00000470258 FOXO6A8MYZ6 492 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 LIN7AO14910 233 aaPredicted RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 BCAMP50895 628 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 DR1Q01658 176 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 EVX2Q03828 476 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 PTK2Q05397 1052 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 USP4Q13107 963 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 ZNF211Q13398 564 aaPredicted RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 MKRN4PQ13434 485 aaPredicted RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 PFKFB3Q16875 520 aaPredicted RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 FAM47EQ6ZV65 393 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 SV2BQ7L1I2 683 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 FITM2Q8N6M3 262 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 FBXO25Q8TCJ0 367 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 RNF25Q96BH1 459 aaPredicted RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 CALML4Q96GE6 196 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 SYT15Q9BQS2 421 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 TRIM7Q9C029 511 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 CCSER1Q9C0I3 900 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 SEMA4AQ9H3S1 761 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 DAAM1Q9Y4D1 1078 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 NFAT5O94916 1531 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 ACTN1P12814 892 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 MUM1Q2TAK8 710 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 VSIG1Q86XK7 387 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 EIF1ADQ8N9N8 165 aaKnown RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 TMEM237Q96Q45 408 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 SLITRK6Q9H5Y7 841 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 RBAK-RBAKDNI3L0D1 243 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 NOL4O94818 638 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 ARID4AP29374 1257 aaPredicted RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 IGHMBP2P38935 993 aaKnown RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 TXKP42681 527 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 PUM3Q15397 648 aaKnown RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 SPATA21Q7Z572 469 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 NBPF5PQ86XG9 351 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms