RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 PRUNE2Q8WUY3 3088 aa20.7■□□□□ 0.9
PHGDH-204ENST00000469443 UNC80Q8N2C7 3258 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 GJB5O95377 273 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 AMHP03971 560 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 NONOQ15233 471 aaKnown RBP eCLIP20.69■□□□□ 0.9
PHGDH-204ENST00000469443 Q4G0T1 1027 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.69■□□□□ 0.9
PHGDH-204ENST00000469443 KRT25Q7Z3Z0 450 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 NECAB1Q8N987 351 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 WASF1Q92558 559 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 APBB2Q92870 758 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 GTF3C6Q969F1 213 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 RIT2Q99578 217 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 IFIH1Q9BYX4 1025 aaKnown RBP20.69■□□□□ 0.9
PHGDH-204ENST00000469443 ORC3Q9UBD5 711 aaPredicted RBP20.69■□□□□ 0.9
PHGDH-204ENST00000469443 PCDHA10Q9Y5I2 948 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 COL1A2P08123 1366 aa20.69■□□□□ 0.9
PHGDH-204ENST00000469443 COL4A4P53420 1690 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-204ENST00000469443 CYP3A7-CYP3A51PA0A087WV96 503 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 DTNBO60941 627 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 PSAPP07602 524 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 CYP3A7P24462 503 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 MRPS6P82932 125 aaKnown RBP20.68■□□□□ 0.9
PHGDH-204ENST00000469443 TAP1Q03518 808 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 ADGRE1Q14246 886 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 MOXD1Q6UVY6 613 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 SLC5A5Q92911 643 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 RAD9AQ99638 391 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 FAM49AQ9H0Q0 323 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-204ENST00000469443 MAFBQ9Y5Q3 323 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-204ENST00000469443 CDY2AQ9Y6F7 541 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 NLRC5Q86WI3 1866 aa20.68■□□□□ 0.9
PHGDH-204ENST00000469443 WDR64B1ANS9 1081 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 GAS7O60861 476 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 ARHGEF15O94989 841 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 TDP2O95551 362 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 GHRP10912 638 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 ATP4AP20648 1035 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 ZNF484Q5JVG2 852 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 LRCH2Q5VUJ6 765 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 IER5Q5VY09 327 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 MTHFD1LQ6UB35 978 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 MYOCDQ8IZQ8 938 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 MBOAT7Q96N66 472 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 TEKT3Q9BXF9 490 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 GJB4Q9NTQ9 266 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 SAMM50Q9Y512 469 aa20.67■□□□□ 0.9
PHGDH-204ENST00000469443 TTC3P53804 2025 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 CCDC194A0A1B0GVG4 234 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 SMIM35A0A1B0GVV1 85 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 LCHNA4D1U4 455 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 KLRC1P26715 233 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 LPIN1Q14693 890 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 INF2Q27J81 1249 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 C8orf34Q49A92 452 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 FBXO47Q5MNV8 452 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 FAM117BQ6P1L5 589 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 CKAP2LQ8IYA6 745 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 BBXQ8WY36 941 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-204ENST00000469443 DISC1Q9NRI5 854 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 GABBR1Q9UBS5 961 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 IGSF9BQ9UPX0 1349 aa20.66■□□□□ 0.9
PHGDH-204ENST00000469443 PRRC2BQ5JSZ5 2229 aaKnown RBP20.65■□□□□ 0.9
PHGDH-204ENST00000469443 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-204ENST00000469443 M0QZ92 97 aa20.65■□□□□ 0.9
PHGDH-204ENST00000469443 PSMD10O75832 226 aa20.65■□□□□ 0.9
PHGDH-204ENST00000469443 FDPSP14324 419 aaKnown RBP20.65■□□□□ 0.9
PHGDH-204ENST00000469443 IGFBP4P22692 258 aa20.65■□□□□ 0.9
PHGDH-204ENST00000469443 SFNP31947 248 aa20.65■□□□□ 0.9
PHGDH-204ENST00000469443 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.65■□□□□ 0.9
PHGDH-204ENST00000469443 NME8Q8N427 588 aa20.65■□□□□ 0.9
PHGDH-204ENST00000469443 NSUN7Q8NE18 718 aaKnown RBP20.65■□□□□ 0.9
PHGDH-204ENST00000469443 UNC45AQ9H3U1 944 aa20.65■□□□□ 0.9
PHGDH-204ENST00000469443 CERS4Q9HA82 394 aa20.65■□□□□ 0.9
PHGDH-204ENST00000469443 TRPV2Q9Y5S1 764 aa20.65■□□□□ 0.9
PHGDH-204ENST00000469443 RALGAPA2Q2PPJ7 1873 aa20.64■□□□□ 0.9
PHGDH-204ENST00000469443 ZBTB42B2RXF5 422 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 JAK3P52333 1124 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 TMEM62Q0P6H9 643 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 TSHZ1Q6ZSZ6 1077 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 USP38Q8NB14 1042 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 ARNTL2Q8WYA1 636 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 GJA10Q969M2 543 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 FAM167AQ96KS9 214 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 DDX25Q9UHL0 483 aaKnown RBP20.64■□□□□ 0.89
PHGDH-204ENST00000469443 INSL6Q9Y581 213 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 SQORQ9Y6N5 450 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 A0A0C4DFX4 3053 aa20.64■□□□□ 0.89
PHGDH-204ENST00000469443 KDM3AQ9Y4C1 1321 aa20.63■□□□□ 0.89
PHGDH-204ENST00000469443 CHMP2AO43633 222 aa20.63■□□□□ 0.89
PHGDH-204ENST00000469443 HTRA4P83105 476 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-204ENST00000469443 LETM2Q2VYF4 491 aa20.63■□□□□ 0.89
PHGDH-204ENST00000469443 NEK8Q86SG6 692 aa20.63■□□□□ 0.89
PHGDH-204ENST00000469443 RDM1Q8NG50 284 aa20.63■□□□□ 0.89
PHGDH-204ENST00000469443 ETNPPLQ8TBG4 499 aa20.63■□□□□ 0.89
PHGDH-204ENST00000469443 OXER1Q8TDS5 423 aa20.63■□□□□ 0.89
PHGDH-204ENST00000469443 TOP1MTQ969P6 601 aa20.63■□□□□ 0.89
PHGDH-204ENST00000469443 CELF4Q9BZC1 486 aaKnown RBP20.63■□□□□ 0.89
PHGDH-204ENST00000469443 CEP131Q9UPN4 1083 aa20.63■□□□□ 0.89
PHGDH-204ENST00000469443 COL4A6Q14031 1691 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms