RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 TTLL3Q9Y4R7 772 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 PCDHA10Q9Y5I2 948 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 PPLO60437 1756 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 SERPING1P05155 500 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 MARK3P27448 753 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 ATP2C1P98194 919 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-213ENST00000469300 EZH2Q15910 746 aaKnown RBP16.32■□□□□ 0.2
LIMS2-213ENST00000469300 ERCC6LQ2NKX8 1250 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 TBX3O15119 743 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 TTC39CQ8N584 583 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 PIGOQ8TEQ8 1089 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 NXF1Q9UBU9 619 aaKnown RBP16.32■□□□□ 0.2
LIMS2-213ENST00000469300 ANAPC4Q9UJX5 808 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 BUB1O43683 1085 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 ZSCAN26Q16670 478 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 STOX1Q6ZVD7 989 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 OXER1Q8TDS5 423 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 BCL2L12Q9HB09 334 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 UBE2TQ9NPD8 197 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-213ENST00000469300 CTNND1O60716 968 aaKnown RBP16.31■□□□□ 0.2
LIMS2-213ENST00000469300 CRCPO75575 148 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 GMPSP49915 693 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-213ENST00000469300 ZBTB33Q86T24 672 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 VSTM4Q8IW00 320 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 KCTD17Q8N5Z5 321 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 AFAP1L1Q8TED9 768 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 MTRQ99707 1265 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 MYOZ2Q9NPC6 264 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 ZDHHC9Q9Y397 364 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-213ENST00000469300 MAPK4P31152 587 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 TCP11X2Q5H9J9 407 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 ZNF667Q5HYK9 610 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
LIMS2-213ENST00000469300 DYDC2Q96IM9 177 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 PPANQ9NQ55 473 aaKnown RBP16.31■□□□□ 0.2
LIMS2-213ENST00000469300 SAMSN1Q9NSI8 373 aaKnown RBP16.31■□□□□ 0.2
LIMS2-213ENST00000469300 ADCY8P40145 1251 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 CDC42EP1Q00587 391 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 DNAJC24Q6P3W2 148 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 CCDC110Q8TBZ0 833 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 PANX2Q96RD6 677 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 TUFT1Q9NNX1 390 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 GJB4Q9NTQ9 266 aa16.31■□□□□ 0.2
LIMS2-213ENST00000469300 PASKQ96RG2 1323 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 SLC25A27O95847 323 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 KRT15P19012 456 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 RASA1P20936 1047 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 RASSF7Q02833 373 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 MTMR2Q13614 643 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 CUL4BQ13620 913 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 ANGEL2Q5VTE6 544 aaKnown RBP16.3■□□□□ 0.2
LIMS2-213ENST00000469300 RBL2Q08999 1139 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 NFX1Q12986 1120 aaKnown RBP16.3■□□□□ 0.2
LIMS2-213ENST00000469300 KYAT1Q16773 422 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 GEN1Q17RS7 908 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 XRRA1Q6P2D8 792 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 SFR1Q86XK3 245 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 COL23A1Q86Y22 540 aaPredicted RBP16.3■□□□□ 0.2
LIMS2-213ENST00000469300 PALM2Q8IXS6 379 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 GUF1Q8N442 669 aaKnown RBP16.3■□□□□ 0.2
LIMS2-213ENST00000469300 PARK7Q99497 189 aaKnown RBP16.3■□□□□ 0.2
LIMS2-213ENST00000469300 GGA3Q9NZ52 723 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 MESDQ14696 234 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 HHATQ5VTY9 493 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 VPS37BQ9H9H4 285 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 GABBR1Q9UBS5 961 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 LCMT1Q9UIC8 334 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 ZNF148Q9UQR1 794 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 TNS2Q63HR2 1409 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 EFCAB8A8MWE9 144 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 STAG2Q8N3U4 1231 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 TMEM260Q9NX78 707 aa16.3■□□□□ 0.2
LIMS2-213ENST00000469300 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
LIMS2-213ENST00000469300 TBC1D8O95759 1140 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 VIMP08670 466 aaKnown RBP16.29■□□□□ 0.2
LIMS2-213ENST00000469300 CCSER1Q9C0I3 900 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
LIMS2-213ENST00000469300 LRRN2O75325 713 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 KRT71Q3SY84 523 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 NAALADL2Q58DX5 795 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 ELP3Q9H9T3 547 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 TNPO2O14787 897 aaKnown RBP16.29■□□□□ 0.2
LIMS2-213ENST00000469300 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
LIMS2-213ENST00000469300 CALR3Q96L12 384 aaKnown RBP16.29■□□□□ 0.2
LIMS2-213ENST00000469300 KRT12Q99456 494 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 HOMER3Q9NSC5 361 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 SLC9A2Q9UBY0 812 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 MAFGO15525 162 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 NR3C1P04150 777 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 ARHGAP25P42331 645 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 EFNA5P52803 228 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 EHHADHQ08426 723 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 IFRD2Q12894 506 aaPredicted RBP16.29■□□□□ 0.2
LIMS2-213ENST00000469300 SWSAP1Q6NVH7 229 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 DSTYKQ6XUX3 929 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 ANKRD13AQ8IZ07 590 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 SMC1BQ8NDV3 1235 aa16.29■□□□□ 0.2
LIMS2-213ENST00000469300 CDC23Q9UJX2 597 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms