RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SPAG1Q07617 926 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 KIF5AQ12840 1032 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 IFT88Q13099 833 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 NCAPHQ15003 741 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 IMMTQ16891 758 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 SWI5Q1ZZU3 235 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 CCDC152Q4G0S7 254 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ANKRD20A8PQ5CZ79 823 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 SPDYCQ5MJ68 293 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 COL13A1Q5TAT6 717 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 C16orf46Q6P387 395 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 CYP26C1Q6V0L0 522 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ZNF365Q70YC5 407 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 DDX46Q7L014 1031 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 CDC37L1Q7L3B6 337 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 TRAPPC11Q7Z392 1133 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 TMTC2Q8N394 836 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 CCDC63Q8NA47 563 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ENOX1Q8TC92 643 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 GPR152Q8TDT2 470 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 RSPH1Q8WYR4 309 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 TEKT1Q969V4 418 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 OPTNQ96CV9 577 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 RAB3IPQ96QF0 476 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 GMLQ99445 158 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 RHOXF2Q9BQY4 288 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 POLR3CQ9BUI4 534 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 MAF1Q9H063 256 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 NSRP1Q9H0G5 558 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 MMADHCQ9H3L0 296 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 UNC45AQ9H3U1 944 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 GOLPH3LQ9H4A5 285 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 RABEP2Q9H5N1 569 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 RMI1Q9H9A7 625 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.34□□□□□ -1.557e-8■■■□□ 15.2
SF3B1-207ENST00000468925 LMCD1Q9NZU5 365 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 NDUFA13Q9P0J0 144 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 WDR35Q9P2L0 1181 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 PUF60Q9UHX1 559 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 WWC3Q9ULE0 1092 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ATP8A1Q9Y2Q0 1164 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 COL4A3BPQ9Y5P4 624 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 SAR1BQ9Y6B6 198 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 CACNA1FO60840 1977 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 MYH15Q9Y2K3 1946 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 PLCH2O75038 1416 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 NPHP4O75161 1426 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-207ENST00000468925 PRG4Q92954 1404 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-207ENST00000468925 ADCY9O60503 1353 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 RFX7Q2KHR2 1363 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 GPR75-ASB3A0A0A6YYF3 556 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 ANKRD65E5RJM6 399 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 AGPSO00116 658 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 ASAP2O43150 1006 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 PPIP5K2O43314 1243 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 KRT86O43790 486 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 TROVE2P10155 538 aaKnown RBP eCLIP5.33□□□□□ -1.56
SF3B1-207ENST00000468925 VDRP11473 427 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 GNAT1P11488 350 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 ATP2A2P16615 1042 aaKnown RBP5.33□□□□□ -1.56
SF3B1-207ENST00000468925 NR1D1P20393 614 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 RPS6KB1P23443 525 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 SKIV2L2P42285 1042 aaKnown RBP5.33□□□□□ -1.56
SF3B1-207ENST00000468925 RANBP1P43487 201 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 GJA8P48165 433 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 TNNI2P48788 182 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 ACADVLP49748 655 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 CLCN2P51788 898 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 PSMC1P62191 440 aaKnown RBP5.33□□□□□ -1.56
SF3B1-207ENST00000468925 ELF3P78545 371 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-207ENST00000468925 MXRA7P84157 204 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 AMPD2Q01433 879 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 RBL2Q08999 1139 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 PAK2Q13177 524 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 CUL4BQ13620 913 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 POSTNQ15063 836 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 NECTIN1Q15223 517 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 ECM1Q16610 540 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 OCLNQ16625 522 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 ME3Q16798 604 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 PLEKHG6Q3KR16 790 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 GJC2Q5T442 439 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-207ENST00000468925 AGBL2Q5U5Z8 902 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 IGF2-ASQ6U949 168 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 CCDC129Q6ZRS4 1044 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 IFT20Q8IY31 132 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 MYOCDQ8IZQ8 938 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 DTWD1Q8N5C7 304 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 SAMD3Q8N6K7 520 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 TC2NQ8N9U0 490 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 SMYD1Q8NB12 490 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 STKLD1Q8NE28 680 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 SMCR8Q8TEV9 937 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-207ENST00000468925 MAIP1Q8WWC4 291 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 PMM1Q92871 262 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 EVI5LQ96CN4 794 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 CYFIP2Q96F07 1278 aa5.33□□□□□ -1.56
SF3B1-207ENST00000468925 RBM17Q96I25 401 aaKnown RBP5.33□□□□□ -1.56
SF3B1-207ENST00000468925 OSBPL2Q9H1P3 480 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms