RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 FARP2O94887 1054 aaPredicted RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 BMP15O95972 392 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 F2P00734 622 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 TFRCP02786 760 aaKnown RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 RPLP2P05387 115 aaKnown RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 FAM86B2P0C5J1 330 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 MYCLP12524 364 aaPredicted RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 KCNA2P16389 499 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 GJB2P29033 226 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 CNGA1P29973 690 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 SFNP31947 248 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 ACLYP53396 1101 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 KRT76Q01546 638 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 PTPN11Q06124 597 aaPredicted RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 ARHGAP1Q07960 439 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 SEMA3FQ13275 785 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 BECN1Q14457 450 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 LRRC41Q15345 812 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 FSCN1Q16658 493 aaKnown RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 DGKDQ16760 1214 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 UBE2SQ16763 222 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 GNASQ5JWF2 1037 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 PRAMEF19Q5SWL8 479 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 JAKMIP3Q5VZ66 844 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 ZNF746Q6NUN9 644 aaPredicted RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 NFRKBQ6P4R8 1299 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 B3GNT9Q6UX72 402 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 SEPT14Q6ZU15 432 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 EEPD1Q7L9B9 569 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 ANKRD33Q7Z3H0 272 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 NECAB2Q7Z6G3 386 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 SESTD1Q86VW0 696 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 DHX37Q8IY37 1157 aaKnown RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 SMAP1Q8IYB5 467 aaPredicted RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 SLFN12Q8IYM2 578 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 KCTD17Q8N5Z5 321 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 SLC43A3Q8NBI5 491 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 ETNPPLQ8TBG4 499 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 TNPO1Q92973 898 aaKnown RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 GLT1D1Q96MS3 346 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 TOX2Q96NM4 488 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 SDF4Q9BRK5 362 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 HTATIP2Q9BUP3 242 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 KATNAL1Q9BW62 490 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 AGO4Q9HCK5 861 aaKnown RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 JPH1Q9HDC5 661 aaPredicted RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 KCNMB3Q9NPA1 279 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 PDGFCQ9NRA1 345 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 POLR3EQ9NVU0 708 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 NXF1Q9UBU9 619 aaKnown RBP3.99□□□□□ -1.77
TRIM59-202ENST00000468542 TCEAL9Q9UHQ7 104 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 PCDHGC3Q9UN70 934 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 SIP14410 1827 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 ARID2Q68CP9 1835 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 CHD7Q9P2D1 2997 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 CDH23Q9H251 3354 aa3.99□□□□□ -1.77
TRIM59-202ENST00000468542 MROH7Q68CQ1 1323 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 EMSYQ7Z589 1322 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 IGKV6D-21A0A0A0MT36 114 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 KRTAP4-8A0A0G2JLE6 195 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 A0A0U1RQG5 324 aaPredicted RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 CCDC85CA6NKD9 419 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 WDR64B1ANS9 1081 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 H3BQV1 296 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 HAS3O00219 553 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 NOP56O00567 594 aaKnown RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 DHX15O43143 795 aaKnown RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 DYNC1LI2O43237 492 aaPredicted RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 SLC26A4O43511 780 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 EDIL3O43854 480 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 NEMFO60524 1076 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PPFIA3O75145 1194 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 CAND2O75155 1236 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 LGR5O75473 907 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PSMD10O75832 226 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 ATG7O95352 703 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 ARIH2O95376 493 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 GGPS1O95749 300 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PGK1P00558 417 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 ASGR1P07306 291 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 HSP90AA1P07900 732 aaKnown RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 MMP3P08254 477 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 C6orf222P0C671 652 aaPredicted RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 SYT1P21579 422 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 MUTP22033 750 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 HOXC8P31273 242 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 ZNF76P36508 570 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PRPHP41219 470 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 JAK3P52333 1124 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 SH3BP2P78314 561 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PURAQ00577 322 aaKnown RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 RBL2Q08999 1139 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 NR5A1Q13285 461 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PPP2R5CQ13362 524 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 KCNA10Q16322 511 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PTPRNQ16849 979 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 LY6KQ17RY6 165 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 INF2Q27J81 1249 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 HSDL1Q3SXM5 330 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms