RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 RFC2P35250 354 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 NLRP5P59047 1200 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 CHMP4BP1P59074 171 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 ZNF200P98182 395 aaPredicted RBP12.68□□□□□ -0.38
COL4A6-205ENST00000468338 TRAF7Q6Q0C0 670 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 MAMSTRQ6ZN01 415 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 SERINC5Q86VE9 423 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 PLA2G4DQ86XP0 818 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 RPUSD2Q8IZ73 545 aaKnown RBP12.68□□□□□ -0.38
COL4A6-205ENST00000468338 AFAP1L1Q8TED9 768 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 GTF3C6Q969F1 213 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 LENG9Q96B70 501 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 SCLYQ96I15 445 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 PCYT2Q99447 389 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 PHF20Q9BVI0 1012 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 C22orf23Q9BZE7 217 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 SLC9A2Q9UBY0 812 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 NOD1Q9Y239 953 aa12.68□□□□□ -0.38
COL4A6-205ENST00000468338 PARNO95453 639 aaKnown RBP12.67□□□□□ -0.38
COL4A6-205ENST00000468338 CCNE2O96020 404 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 CKBP12277 381 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 NDUFV2P19404 249 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 ZNF76P36508 570 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 ACTR2P61160 394 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 SETQ01105 290 aaPredicted RBP12.67□□□□□ -0.38
COL4A6-205ENST00000468338 SP4Q02446 784 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 ST3GAL1Q11201 340 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 BLIDQ8IZY5 108 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 NSUN7Q8NE18 718 aaKnown RBP12.67□□□□□ -0.38
COL4A6-205ENST00000468338 WNT8BQ93098 351 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 SMARCAD1Q9H4L7 1026 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 PKD2L1Q9P0L9 805 aa12.67□□□□□ -0.38
COL4A6-205ENST00000468338 ZNF215Q9UL58 517 aaPredicted RBP12.67□□□□□ -0.38
COL4A6-205ENST00000468338 LAMA2P24043 3122 aaKnown RBP12.67□□□□□ -0.38
COL4A6-205ENST00000468338 MYO9BQ13459 2157 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 CYP3A7-CYP3A51PA0A087WV96 503 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-205ENST00000468338 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-205ENST00000468338 C17orf102A2RUQ5 167 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 IPO5O00410 1097 aaKnown RBP12.66□□□□□ -0.38
COL4A6-205ENST00000468338 FGBP02675 491 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 CXCL10P02778 98 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 SELPP16109 830 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 CYP3A7P24462 503 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 USP46P62068 366 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 UTP14CQ5TAP6 766 aaKnown RBP12.66□□□□□ -0.38
COL4A6-205ENST00000468338 ABHD15Q6UXT9 468 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 PLPPR4Q7Z2D5 763 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 RPAINQ86UA6 219 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 CCDC155Q8N6L0 562 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 TBCKQ8TEA7 893 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 ATP6V0A1Q93050 837 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 MBOAT7Q96N66 472 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 SETD4Q9NVD3 440 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 ERAP1Q9NZ08 941 aa12.66□□□□□ -0.38
COL4A6-205ENST00000468338 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-205ENST00000468338 ORC3Q9UBD5 711 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-205ENST00000468338 NRCAMQ92823 1304 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 WDR81Q562E7 1941 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 MBLAC1A4D2B0 266 aaPredicted RBP12.65□□□□□ -0.38
COL4A6-205ENST00000468338 SNPHO15079 494 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 TREHO43280 583 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 GNAT1P11488 350 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 QPCTQ16769 361 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 PRR16Q569H4 304 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 MOXD1Q6UVY6 613 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 LRRC8DQ7L1W4 858 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 LMBR1Q8WVP7 490 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 GJB4Q9NTQ9 266 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 TBC1D22BQ9NU19 505 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 KCNJ14Q9UNX9 436 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 LIMCH1Q9UPQ0 1083 aa12.65□□□□□ -0.38
COL4A6-205ENST00000468338 MYH9P35579 1960 aaKnown RBP12.65□□□□□ -0.38
COL4A6-205ENST00000468338 TMEM265A0A087WTH1 108 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 NBNO60934 754 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 DTNBO60941 627 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 CAND2O75155 1236 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 XBP1P17861 261 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 ABL2P42684 1182 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 SLC26A2P50443 739 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 STAT5BP51692 787 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 MBTPS1Q14703 1052 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 Q4G0T1 1027 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 MARCH8Q5T0T0 291 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 ZNF618Q5T7W0 954 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 ZNF746Q6NUN9 644 aaPredicted RBP12.64□□□□□ -0.39
COL4A6-205ENST00000468338 OTOP2Q7RTS6 562 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 WASF1Q92558 559 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 GLG1Q92896 1179 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 ZNF577Q9BSK1 485 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 MTIF3Q9H2K0 278 aaKnown RBP12.64□□□□□ -0.39
COL4A6-205ENST00000468338 MTMR10Q9NXD2 777 aa12.64□□□□□ -0.39
COL4A6-205ENST00000468338 MSH4O15457 936 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 PPFIA1Q13136 1202 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 PLCB4Q15147 1175 aa12.63□□□□□ -0.39
COL4A6-205ENST00000468338 NONOQ15233 471 aaKnown RBP eCLIP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms