RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 TMCO2Q7Z6W1 182 aaPredicted RBP19.37■□□□□ 0.69
SSBP1-207ENST00000468267 SMAP1Q8IYB5 467 aaPredicted RBP19.37■□□□□ 0.69
SSBP1-207ENST00000468267 NECAB1Q8N987 351 aa19.37■□□□□ 0.69
SSBP1-207ENST00000468267 TRAPPC12Q8WVT3 735 aa19.37■□□□□ 0.69
SSBP1-207ENST00000468267 GAS2L1Q99501 681 aaPredicted RBP19.37■□□□□ 0.69
SSBP1-207ENST00000468267 PCDHA2Q9Y5H9 948 aa19.37■□□□□ 0.69
SSBP1-207ENST00000468267 SIP14410 1827 aa19.37■□□□□ 0.69
SSBP1-207ENST00000468267 HBP1O60381 514 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 DTNBO60941 627 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 LARGE1O95461 756 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 XBP1P17861 261 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 MGAT3Q09327 533 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 Q4G0T1 1027 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 PDXDC2PQ6P474 469 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.36■□□□□ 0.69
SSBP1-207ENST00000468267 KRT25Q7Z3Z0 450 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 ATP8B4Q8TF62 1192 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 SLC5A5Q92911 643 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 GTF3C6Q969F1 213 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 ZBTB10Q96DT7 871 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 RIT2Q99578 217 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 ZBED2Q9BTP6 218 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 ORC3Q9UBD5 711 aaPredicted RBP19.36■□□□□ 0.69
SSBP1-207ENST00000468267 TCEAL9Q9UHQ7 104 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 PCDHA10Q9Y5I2 948 aa19.36■□□□□ 0.69
SSBP1-207ENST00000468267 MAFBQ9Y5Q3 323 aaPredicted RBP19.36■□□□□ 0.69
SSBP1-207ENST00000468267 GJB5O95377 273 aa19.35■□□□□ 0.69
SSBP1-207ENST00000468267 PSAPP07602 524 aa19.35■□□□□ 0.69
SSBP1-207ENST00000468267 ATP4AP20648 1035 aa19.35■□□□□ 0.69
SSBP1-207ENST00000468267 TAP1Q03518 808 aa19.35■□□□□ 0.69
SSBP1-207ENST00000468267 NONOQ15233 471 aaKnown RBP eCLIP19.35■□□□□ 0.69
SSBP1-207ENST00000468267 MTHFD1LQ6UB35 978 aa19.35■□□□□ 0.69
SSBP1-207ENST00000468267 WASF1Q92558 559 aa19.35■□□□□ 0.69
SSBP1-207ENST00000468267 APBB2Q92870 758 aa19.35■□□□□ 0.69
SSBP1-207ENST00000468267 RAD9AQ99638 391 aa19.35■□□□□ 0.69
SSBP1-207ENST00000468267 FAM49AQ9H0Q0 323 aaPredicted RBP19.35■□□□□ 0.69
SSBP1-207ENST00000468267 VCANP13611 3396 aa19.35■□□□□ 0.69
SSBP1-207ENST00000468267 ARHGEF15O94989 841 aa19.34■□□□□ 0.69
SSBP1-207ENST00000468267 AMHP03971 560 aa19.34■□□□□ 0.69
SSBP1-207ENST00000468267 FDPSP14324 419 aaKnown RBP19.34■□□□□ 0.69
SSBP1-207ENST00000468267 MRPS6P82932 125 aaKnown RBP19.34■□□□□ 0.69
SSBP1-207ENST00000468267 ADGRE1Q14246 886 aa19.34■□□□□ 0.69
SSBP1-207ENST00000468267 LPIN1Q14693 890 aa19.34■□□□□ 0.69
SSBP1-207ENST00000468267 C8orf34Q49A92 452 aa19.34■□□□□ 0.69
SSBP1-207ENST00000468267 ZNF484Q5JVG2 852 aa19.34■□□□□ 0.69
SSBP1-207ENST00000468267 MOXD1Q6UVY6 613 aa19.34■□□□□ 0.69
SSBP1-207ENST00000468267 MBOAT7Q96N66 472 aa19.34■□□□□ 0.69
SSBP1-207ENST00000468267 IFIH1Q9BYX4 1025 aaKnown RBP19.34■□□□□ 0.69
SSBP1-207ENST00000468267 GJB4Q9NTQ9 266 aa19.34■□□□□ 0.69
SSBP1-207ENST00000468267 CDY2AQ9Y6F7 541 aa19.34■□□□□ 0.69
SSBP1-207ENST00000468267 PRRC2BQ5JSZ5 2229 aaKnown RBP19.34■□□□□ 0.69
SSBP1-207ENST00000468267 COL1A2P08123 1366 aa19.33■□□□□ 0.69
SSBP1-207ENST00000468267 SMIM35A0A1B0GVV1 85 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 LCHNA4D1U4 455 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 WDR64B1ANS9 1081 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 GAS7O60861 476 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 TDP2O95551 362 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 GHRP10912 638 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 KLRC1P26715 233 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 INF2Q27J81 1249 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 FBXO47Q5MNV8 452 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 LRCH2Q5VUJ6 765 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 IER5Q5VY09 327 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 NME8Q8N427 588 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 BBXQ8WY36 941 aaPredicted RBP19.33■□□□□ 0.68
SSBP1-207ENST00000468267 DISC1Q9NRI5 854 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 GABBR1Q9UBS5 961 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 SAMM50Q9Y512 469 aa19.33■□□□□ 0.68
SSBP1-207ENST00000468267 CCDC194A0A1B0GVG4 234 aa19.32■□□□□ 0.68
SSBP1-207ENST00000468267 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.32■□□□□ 0.68
SSBP1-207ENST00000468267 ZBTB42B2RXF5 422 aa19.32■□□□□ 0.68
SSBP1-207ENST00000468267 PSMD10O75832 226 aa19.32■□□□□ 0.68
SSBP1-207ENST00000468267 FAM117BQ6P1L5 589 aa19.32■□□□□ 0.68
SSBP1-207ENST00000468267 CKAP2LQ8IYA6 745 aa19.32■□□□□ 0.68
SSBP1-207ENST00000468267 MYOCDQ8IZQ8 938 aa19.32■□□□□ 0.68
SSBP1-207ENST00000468267 NSUN7Q8NE18 718 aaKnown RBP19.32■□□□□ 0.68
SSBP1-207ENST00000468267 OXER1Q8TDS5 423 aa19.32■□□□□ 0.68
SSBP1-207ENST00000468267 GJA10Q969M2 543 aa19.32■□□□□ 0.68
SSBP1-207ENST00000468267 TEKT3Q9BXF9 490 aa19.32■□□□□ 0.68
SSBP1-207ENST00000468267 CERS4Q9HA82 394 aa19.32■□□□□ 0.68
SSBP1-207ENST00000468267 TTC3P53804 2025 aa19.31■□□□□ 0.68
SSBP1-207ENST00000468267 IGFBP4P22692 258 aa19.31■□□□□ 0.68
SSBP1-207ENST00000468267 SFNP31947 248 aa19.31■□□□□ 0.68
SSBP1-207ENST00000468267 TSHZ1Q6ZSZ6 1077 aa19.31■□□□□ 0.68
SSBP1-207ENST00000468267 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.31■□□□□ 0.68
SSBP1-207ENST00000468267 ETNPPLQ8TBG4 499 aa19.31■□□□□ 0.68
SSBP1-207ENST00000468267 TOP1MTQ969P6 601 aa19.31■□□□□ 0.68
SSBP1-207ENST00000468267 UNC45AQ9H3U1 944 aa19.31■□□□□ 0.68
SSBP1-207ENST00000468267 DDX25Q9UHL0 483 aaKnown RBP19.31■□□□□ 0.68
SSBP1-207ENST00000468267 INSL6Q9Y581 213 aa19.31■□□□□ 0.68
SSBP1-207ENST00000468267 TRPV2Q9Y5S1 764 aa19.31■□□□□ 0.68
SSBP1-207ENST00000468267 SQORQ9Y6N5 450 aa19.31■□□□□ 0.68
SSBP1-207ENST00000468267 SPTBN5Q9NRC6 3674 aaKnown RBP19.31■□□□□ 0.68
SSBP1-207ENST00000468267 IGSF9BQ9UPX0 1349 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 EPOPA6NHQ4 379 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 M0QZ92 97 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 JAK3P52333 1124 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 HTRA4P83105 476 aaPredicted RBP19.3■□□□□ 0.68
SSBP1-207ENST00000468267 TMEM62Q0P6H9 643 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 LETM2Q2VYF4 491 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms