RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 H3BQV1 296 aa29.26■■■□□ 2.27
PDCD4-205ENST00000467574 HBP1O60381 514 aa29.26■■■□□ 2.27
PDCD4-205ENST00000467574 SELPP16109 830 aa29.26■■■□□ 2.27
PDCD4-205ENST00000467574 ORC2Q13416 577 aaPredicted RBP29.26■■■□□ 2.27
PDCD4-205ENST00000467574 NBR1Q14596 966 aa29.26■■■□□ 2.27
PDCD4-205ENST00000467574 GPNMBQ14956 572 aa29.26■■■□□ 2.27
PDCD4-205ENST00000467574 LRRC8DQ7L1W4 858 aa29.26■■■□□ 2.27
PDCD4-205ENST00000467574 RETREG2Q8NC44 543 aa29.26■■■□□ 2.27
PDCD4-205ENST00000467574 RRN3P2A6NIE6 340 aa29.25■■■□□ 2.27
PDCD4-205ENST00000467574 ACRP10323 421 aa29.25■■■□□ 2.27
PDCD4-205ENST00000467574 IGBP1P78318 339 aa29.25■■■□□ 2.27
PDCD4-205ENST00000467574 PRKCEQ02156 737 aa29.25■■■□□ 2.27
PDCD4-205ENST00000467574 TMEM240Q5SV17 173 aa29.25■■■□□ 2.27
PDCD4-205ENST00000467574 ZNF618Q5T7W0 954 aa29.25■■■□□ 2.27
PDCD4-205ENST00000467574 MCTP1Q6DN14 999 aa29.25■■■□□ 2.27
PDCD4-205ENST00000467574 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.25■■■□□ 2.27
PDCD4-205ENST00000467574 LOXHD1Q8IVV2 1947 aa29.25■■■□□ 2.27
PDCD4-205ENST00000467574 COL1A2P08123 1366 aa29.25■■■□□ 2.27
PDCD4-205ENST00000467574 RBAK-RBAKDNI3L0D1 243 aa29.24■■■□□ 2.27
PDCD4-205ENST00000467574 BAG4O95429 457 aaKnown RBP29.24■■■□□ 2.27
PDCD4-205ENST00000467574 MBTPS1Q14703 1052 aa29.24■■■□□ 2.27
PDCD4-205ENST00000467574 ZNF174Q15697 407 aa29.24■■■□□ 2.27
PDCD4-205ENST00000467574 HSCBQ8IWL3 235 aa29.24■■■□□ 2.27
PDCD4-205ENST00000467574 BBXQ8WY36 941 aaPredicted RBP29.24■■■□□ 2.27
PDCD4-205ENST00000467574 NOL7Q9UMY1 257 aaKnown RBP29.24■■■□□ 2.27
PDCD4-205ENST00000467574 ARID2Q68CP9 1835 aa29.24■■■□□ 2.27
PDCD4-205ENST00000467574 STBD1O95210 358 aa29.23■■■□□ 2.27
PDCD4-205ENST00000467574 RFC2P35250 354 aa29.23■■■□□ 2.27
PDCD4-205ENST00000467574 THPOP40225 353 aa29.23■■■□□ 2.27
PDCD4-205ENST00000467574 TAF2Q6P1X5 1199 aa29.23■■■□□ 2.27
PDCD4-205ENST00000467574 RPAINQ86UA6 219 aa29.23■■■□□ 2.27
PDCD4-205ENST00000467574 CKAP2LQ8IYA6 745 aa29.23■■■□□ 2.27
PDCD4-205ENST00000467574 TNPO1Q92973 898 aaKnown RBP29.23■■■□□ 2.27
PDCD4-205ENST00000467574 FAM167AQ96KS9 214 aa29.23■■■□□ 2.27
PDCD4-205ENST00000467574 FOXD4L1Q9NU39 408 aa29.23■■■□□ 2.27
PDCD4-205ENST00000467574 MARCH6O60337 910 aa29.22■■■□□ 2.27
PDCD4-205ENST00000467574 CAND2O75155 1236 aa29.22■■■□□ 2.27
PDCD4-205ENST00000467574 OATP04181 439 aa29.22■■■□□ 2.27
PDCD4-205ENST00000467574 ZNF484Q5JVG2 852 aa29.22■■■□□ 2.27
PDCD4-205ENST00000467574 PSRC1Q6PGN9 363 aaPredicted RBP29.22■■■□□ 2.27
PDCD4-205ENST00000467574 C4orf32Q8N8J7 132 aa29.22■■■□□ 2.27
PDCD4-205ENST00000467574 BANK1Q8NDB2 785 aa29.22■■■□□ 2.27
PDCD4-205ENST00000467574 TTC12Q9H892 705 aaPredicted RBP29.22■■■□□ 2.27
PDCD4-205ENST00000467574 PCDHB6Q9Y5E3 794 aa29.22■■■□□ 2.27
PDCD4-205ENST00000467574 NBNO60934 754 aa29.21■■■□□ 2.27
PDCD4-205ENST00000467574 RASIP1Q5U651 963 aa29.21■■■□□ 2.27
PDCD4-205ENST00000467574 NCAPH2Q6IBW4 605 aa29.21■■■□□ 2.27
PDCD4-205ENST00000467574 MTHFD1LQ6UB35 978 aa29.21■■■□□ 2.27
PDCD4-205ENST00000467574 ZNF365Q70YC5 407 aa29.21■■■□□ 2.27
PDCD4-205ENST00000467574 WRAP73Q9P2S5 460 aaPredicted RBP29.21■■■□□ 2.27
PDCD4-205ENST00000467574 PCDHA12Q9UN75 941 aa29.21■■■□□ 2.27
PDCD4-205ENST00000467574 PCDHA2Q9Y5H9 948 aa29.21■■■□□ 2.27
PDCD4-205ENST00000467574 OR52Z1P0C646 297 aa29.2■■■□□ 2.26
PDCD4-205ENST00000467574 PDCP20941 246 aa29.2■■■□□ 2.26
PDCD4-205ENST00000467574 TXKP42681 527 aa29.2■■■□□ 2.26
PDCD4-205ENST00000467574 EPHA7Q15375 998 aa29.2■■■□□ 2.26
PDCD4-205ENST00000467574 LRIT3Q3SXY7 679 aa29.2■■■□□ 2.26
PDCD4-205ENST00000467574 TRMT1LQ7Z2T5 733 aaKnown RBP29.2■■■□□ 2.26
PDCD4-205ENST00000467574 DEFB128Q7Z7B8 93 aa29.2■■■□□ 2.26
PDCD4-205ENST00000467574 PTPRSQ13332 1948 aa29.2■■■□□ 2.26
PDCD4-205ENST00000467574 C22orf31O95567 290 aa29.19■■■□□ 2.26
PDCD4-205ENST00000467574 CXCL10P02778 98 aa29.19■■■□□ 2.26
PDCD4-205ENST00000467574 PFKMP08237 780 aa29.19■■■□□ 2.26
PDCD4-205ENST00000467574 CTSHP09668 335 aa29.19■■■□□ 2.26
PDCD4-205ENST00000467574 SYT1P21579 422 aa29.19■■■□□ 2.26
PDCD4-205ENST00000467574 PSMC5P62195 406 aa29.19■■■□□ 2.26
PDCD4-205ENST00000467574 FAM26DQ5JW98 314 aa29.19■■■□□ 2.26
PDCD4-205ENST00000467574 RPUSD2Q8IZ73 545 aaKnown RBP29.19■■■□□ 2.26
PDCD4-205ENST00000467574 DNAJB3Q8WWF6 145 aa29.19■■■□□ 2.26
PDCD4-205ENST00000467574 MICAL3Q7RTP6 2002 aa29.18■■■□□ 2.26
PDCD4-205ENST00000467574 RSPH10B2B2RC85 870 aa29.18■■■□□ 2.26
PDCD4-205ENST00000467574 SOX1O00570 391 aaPredicted RBP29.18■■■□□ 2.26
PDCD4-205ENST00000467574 PARNO95453 639 aaKnown RBP29.18■■■□□ 2.26
PDCD4-205ENST00000467574 RSPH10BP0C881 870 aa29.18■■■□□ 2.26
PDCD4-205ENST00000467574 KLRC1P26715 233 aa29.18■■■□□ 2.26
PDCD4-205ENST00000467574 MGAT3Q09327 533 aa29.18■■■□□ 2.26
PDCD4-205ENST00000467574 RILPL1Q5EBL4 403 aa29.18■■■□□ 2.26
PDCD4-205ENST00000467574 HERVK_113Q902F9 699 aa29.18■■■□□ 2.26
PDCD4-205ENST00000467574 RNPC3Q96LT9 517 aaKnown RBP29.18■■■□□ 2.26
PDCD4-205ENST00000467574 OSBPL7Q9BZF2 842 aa29.18■■■□□ 2.26
PDCD4-205ENST00000467574 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.18■■■□□ 2.26
PDCD4-205ENST00000467574 RGL1Q9NZL6 768 aa29.18■■■□□ 2.26
PDCD4-205ENST00000467574 GBF1Q92538 1859 aa29.17■■■□□ 2.26
PDCD4-205ENST00000467574 SMIM35A0A1B0GVV1 85 aa29.17■■■□□ 2.26
PDCD4-205ENST00000467574 VPS37CA5D8V6 355 aaPredicted RBP29.17■■■□□ 2.26
PDCD4-205ENST00000467574 TMEM150BA6NC51 233 aa29.17■■■□□ 2.26
PDCD4-205ENST00000467574 POTEMA6NI47 508 aa29.17■■■□□ 2.26
PDCD4-205ENST00000467574 P4HBP07237 508 aaKnown RBP29.17■■■□□ 2.26
PDCD4-205ENST00000467574 QARSP47897 775 aaKnown RBP29.17■■■□□ 2.26
PDCD4-205ENST00000467574 FXR1P51114 621 aaKnown RBP eCLIP29.17■■■□□ 2.26
PDCD4-205ENST00000467574 TARBP2Q15633 366 aaKnown RBP29.17■■■□□ 2.26
PDCD4-205ENST00000467574 XKR3Q5GH77 459 aa29.17■■■□□ 2.26
PDCD4-205ENST00000467574 CEP89Q96ST8 783 aa29.17■■■□□ 2.26
PDCD4-205ENST00000467574 LXNQ9BS40 222 aa29.17■■■□□ 2.26
PDCD4-205ENST00000467574 NIFKQ9BYG3 293 aaKnown RBP29.17■■■□□ 2.26
PDCD4-205ENST00000467574 FAM49AQ9H0Q0 323 aaPredicted RBP29.17■■■□□ 2.26
PDCD4-205ENST00000467574 CEP131Q9UPN4 1083 aa29.17■■■□□ 2.26
PDCD4-205ENST00000467574 MYH15Q9Y2K3 1946 aa29.17■■■□□ 2.26
PDCD4-205ENST00000467574 CHRNA1P02708 482 aa29.16■■■□□ 2.26
PDCD4-205ENST00000467574 TCTN1Q2MV58 587 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms