RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 SLFN12Q8IYM2 578 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 PDCL2Q8N4E4 241 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 USP38Q8NB14 1042 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 ATL2Q8NHH9 583 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 CD99L2Q8TCZ2 262 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 ATXN2LQ8WWM7 1075 aaKnown RBP4.04□□□□□ -1.76
SORT1-202ENST00000466471 RAPGEF4Q8WZA2 1011 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 PLEKHF1Q96S99 279 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 CDC6Q99741 560 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 ORAI3Q9BRQ5 295 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 AARSD1Q9BTE6 412 aaKnown RBP4.04□□□□□ -1.76
SORT1-202ENST00000466471 SMG9Q9H0W8 520 aaKnown RBP4.04□□□□□ -1.76
SORT1-202ENST00000466471 PCMTD2Q9NV79 361 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 BSDC1Q9NW68 430 aaPredicted RBP4.04□□□□□ -1.76
SORT1-202ENST00000466471 REV1Q9UBZ9 1251 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 NARFQ9UHQ1 456 aa4.04□□□□□ -1.76
SORT1-202ENST00000466471 COL3A1P02461 1466 aaPredicted RBP4.04□□□□□ -1.76
SORT1-202ENST00000466471 A0A1W2PP64 1363 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 BPTFQ12830 3046 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 MYO9BQ13459 2157 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 CHD7Q9P2D1 2997 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 TRIOO75962 3097 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 TRBV23-1A0A0A0MS06 115 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 B4E1Z4 1266 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 H3BRJ5 948 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 ZEB2O60315 1214 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 CAPNS1P04632 268 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 TRIM27P14373 513 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 EIF2AK2P19525 551 aaKnown RBP4.03□□□□□ -1.76
SORT1-202ENST00000466471 ITGB8P26012 769 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 HOXC9P31274 260 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 MAGEA10P43363 369 aaPredicted RBP4.03□□□□□ -1.76
SORT1-202ENST00000466471 ARL4DP49703 201 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 PMS1P54277 932 aaKnown RBP4.03□□□□□ -1.76
SORT1-202ENST00000466471 ATP11AP98196 1134 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 GABPB1Q06547 395 aaPredicted RBP4.03□□□□□ -1.76
SORT1-202ENST00000466471 FAPQ12884 760 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 CEP135Q66GS9 1140 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 CYFIP1Q7L576 1253 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 SPATS2Q86XZ4 545 aaKnown RBP4.03□□□□□ -1.76
SORT1-202ENST00000466471 KIF18BQ86Y91 864 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 PASD1Q8IV76 773 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 TCEAL8Q8IYN2 117 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 MYO1HQ8N1T3 1032 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 CRACR2BQ8N4Y2 399 aaPredicted RBP4.03□□□□□ -1.76
SORT1-202ENST00000466471 GRIN3AQ8TCU5 1115 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 STK35Q8TDR2 534 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 MYLIPQ8WY64 445 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 KLHL6Q8WZ60 621 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 CHMP4CQ96CF2 233 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 LTV1Q96GA3 475 aaPredicted RBP4.03□□□□□ -1.76
SORT1-202ENST00000466471 EXOC2Q96KP1 924 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 ASB2Q96Q27 587 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 USP26Q9BXU7 913 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 ASPSCR1Q9BZE9 553 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 CDH19Q9H159 772 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 KCNH6Q9H252 994 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 AKTIPQ9H8T0 292 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 GOLGA2P5Q9HBQ8 144 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 ARNT2Q9HBZ2 717 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 OSGEPQ9NPF4 335 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 ARHGEF4Q9NR80 690 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 KCND1Q9NSA2 647 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 USP25Q9UHP3 1055 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 DDX49Q9Y6V7 483 aaKnown RBP4.03□□□□□ -1.76
SORT1-202ENST00000466471 DMDP11532 3685 aa4.03□□□□□ -1.76
SORT1-202ENST00000466471 FAM205AQ6ZU69 1335 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 DDX60Q8IY21 1712 aaKnown RBP4.02□□□□□ -1.77
SORT1-202ENST00000466471 A0A1W2PQU0 124 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 ADM5C9JUS6 153 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 J3QW42 95 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 GPR39O43194 453 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 FARP2O94887 1054 aaPredicted RBP4.02□□□□□ -1.77
SORT1-202ENST00000466471 ASLP04424 464 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 APPP05067 770 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 FOSL2P15408 326 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 NAT1P18440 290 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 PLCG1P19174 1290 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 FSTP19883 344 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 FLT3P36888 993 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 TNNT2P45379 298 aaPredicted RBP4.02□□□□□ -1.77
SORT1-202ENST00000466471 GMPSP49915 693 aaPredicted RBP4.02□□□□□ -1.77
SORT1-202ENST00000466471 YARSP54577 528 aaKnown RBP4.02□□□□□ -1.77
SORT1-202ENST00000466471 GABREP78334 506 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 PTPN11Q06124 597 aaPredicted RBP4.02□□□□□ -1.77
SORT1-202ENST00000466471 PIN1Q13526 163 aaPredicted RBP4.02□□□□□ -1.77
SORT1-202ENST00000466471 MAP9Q49MG5 647 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 ANKRD39Q53RE8 183 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 HSP90AB4PQ58FF6 505 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 WIPI1Q5MNZ9 446 aaPredicted RBP4.02□□□□□ -1.77
SORT1-202ENST00000466471 MCTP1Q6DN14 999 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 GDF6Q6KF10 455 aaPredicted RBP4.02□□□□□ -1.77
SORT1-202ENST00000466471 INTS5Q6P9B9 1019 aaKnown RBP4.02□□□□□ -1.77
SORT1-202ENST00000466471 OLFM4Q6UX06 510 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 GSTCDQ8NEC7 633 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 WDR66Q8TBY9 1149 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 GPT2Q8TD30 523 aa4.02□□□□□ -1.77
SORT1-202ENST00000466471 SLC39A13Q96H72 371 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms