RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 ZC2HC1CQ53FD0 456 aaPredicted RBP11.44□□□□□ -0.58
UFD1-206ENST00000466373 FOXR2Q6PJQ5 311 aa11.44□□□□□ -0.58
UFD1-206ENST00000466373 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.44□□□□□ -0.58
UFD1-206ENST00000466373 FAM184BQ9ULE4 1060 aa11.44□□□□□ -0.58
UFD1-206ENST00000466373 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 ESYT3A0FGR9 886 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 ZSCAN5CA6NGD5 496 aaPredicted RBP11.43□□□□□ -0.58
UFD1-206ENST00000466373 TULP1O00294 542 aaPredicted RBP11.43□□□□□ -0.58
UFD1-206ENST00000466373 UCHL3P15374 230 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 NMT1P30419 496 aaKnown RBP11.43□□□□□ -0.58
UFD1-206ENST00000466373 MARSP56192 900 aaKnown RBP11.43□□□□□ -0.58
UFD1-206ENST00000466373 EXOC3L4Q17RC7 722 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 EDRF1Q3B7T1 1238 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 MOXD1Q6UVY6 613 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 CDAN1Q8IWY9 1227 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 FAM20AQ96MK3 541 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 WDR18Q9BV38 432 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 NUCKS1Q9H1E3 243 aaKnown RBP11.43□□□□□ -0.58
UFD1-206ENST00000466373 SCAF8Q9UPN6 1271 aaKnown RBP11.43□□□□□ -0.58
UFD1-206ENST00000466373 RBAK-RBAKDNI3L0D1 243 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 FOSP01100 380 aaPredicted RBP11.43□□□□□ -0.58
UFD1-206ENST00000466373 AFPP02771 609 aaKnown RBP11.43□□□□□ -0.58
UFD1-206ENST00000466373 NR3C1P04150 777 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 STAT2P52630 851 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 MMGT1Q8N4V1 131 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 MED4Q9NPJ6 270 aa11.43□□□□□ -0.58
UFD1-206ENST00000466373 AJAP1Q9UKB5 411 aaPredicted RBP11.43□□□□□ -0.58
UFD1-206ENST00000466373 YDJCA8MPS7 323 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 TBX3O15119 743 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 PPIP5K2O43314 1243 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 PRLRP16471 622 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 PON1P27169 355 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 NAB2Q15742 525 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 C8orf74Q6P047 294 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 PPP4R3CPQ6ZMV5 832 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 MIGA2Q7L4E1 593 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 ZNF571Q7Z3V5 609 aaPredicted RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 RNF10Q8N5U6 811 aaKnown RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 MYCT1Q8N699 235 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 SYN2Q92777 582 aaPredicted RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 DYDC2Q96IM9 177 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 PKD2L1Q9P0L9 805 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 ZC3H4Q9UPT8 1303 aaKnown RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 ASTN1O14525 1302 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 RAD17O75943 681 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 NOP2P46087 812 aaKnown RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 COG2Q14746 738 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 LRCH2Q5VUJ6 765 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 RINT1Q6NUQ1 792 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 EPM2AIP1Q7L775 607 aaPredicted RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 TRMT1LQ7Z2T5 733 aaKnown RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 MSL3Q8N5Y2 521 aaKnown RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 RBM46Q8TBY0 533 aaKnown RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 MRIQ9BWK5 157 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 VIPAS39Q9H9C1 493 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 LUC7LQ9NQ29 371 aaKnown RBP11.42□□□□□ -0.58
UFD1-206ENST00000466373 AIPL1Q9NZN9 384 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 TRAF3IP3Q9Y228 551 aa11.42□□□□□ -0.58
UFD1-206ENST00000466373 IGLV3-22A0A075B6J6 115 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 AGPSO00116 658 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 DDX39AO00148 427 aaKnown RBP11.41□□□□□ -0.58
UFD1-206ENST00000466373 C21orf2O43822 256 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 CALUO43852 315 aaPredicted RBP11.41□□□□□ -0.58
UFD1-206ENST00000466373 HOXA7P31268 230 aaPredicted RBP11.41□□□□□ -0.58
UFD1-206ENST00000466373 PLS1Q14651 629 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 CFAP221Q4G0U5 840 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 IRF2BP2Q7Z5L9 587 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 AENQ8WTP8 325 aaKnown RBP11.41□□□□□ -0.58
UFD1-206ENST00000466373 FBXO28Q9NVF7 368 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 STIM2Q9P246 746 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 GOLGA6BA6NDN3 693 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 PDXKO00764 312 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 SLITRK3O94933 977 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 FAM13AO94988 1023 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 ACTN2P35609 894 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 TAF3Q5VWG9 929 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 FOXR1Q6PIV2 292 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 LEKR1Q6ZMV7 388 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 MAEAQ7L5Y9 396 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 OTOP1Q7RTM1 612 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 FRMD5Q7Z6J6 570 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 ZC3H3Q8IXZ2 948 aaKnown RBP11.41□□□□□ -0.58
UFD1-206ENST00000466373 IFT81Q8WYA0 676 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 VEZTQ9HBM0 779 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 GCNT4Q9P109 453 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 BCS1LQ9Y276 419 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
UFD1-206ENST00000466373 GRID2IPA4D2P6 1211 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 EYA4O95677 639 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 GLI1P08151 1106 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 EPB41P11171 864 aaKnown RBP11.41□□□□□ -0.58
UFD1-206ENST00000466373 CIITAP33076 1130 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 AARSP49588 968 aaKnown RBP eCLIP11.41□□□□□ -0.58
UFD1-206ENST00000466373 GOLGA6L1Q8N7Z2 621 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 PROCA1Q8NCQ7 364 aaPredicted RBP11.41□□□□□ -0.58
UFD1-206ENST00000466373 SLC35C1Q96A29 364 aa11.41□□□□□ -0.58
UFD1-206ENST00000466373 TYW1Q9NV66 732 aaKnown RBP11.41□□□□□ -0.58
UFD1-206ENST00000466373 PSD3Q9NYI0 1048 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms