RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CDCA5Q96FF9 252 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 CLMNQ96JQ2 1002 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 ERGIC2Q96RQ1 377 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 NDST4Q9H3R1 872 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 ELP3Q9H9T3 547 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 P4HBP07237 508 aaKnown RBP20.17■□□□□ 0.82
COL9A3-205ENST00000466192 WDR24Q96S15 920 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 CHP1Q99653 195 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 TTYH3Q9C0H2 523 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 L2HGDHQ9H9P8 463 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 AGPAT5Q9NUQ2 364 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 IRF6O14896 467 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 PEX10O60683 326 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 PRPF6O94906 941 aaKnown RBP20.17■□□□□ 0.82
COL9A3-205ENST00000466192 GAP43P17677 238 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 CCND2P30279 289 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 EPHX2P34913 555 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 NCBP1Q09161 790 aaKnown RBP20.17■□□□□ 0.82
COL9A3-205ENST00000466192 FKBP15Q5T1M5 1219 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 XRRA1Q6P2D8 792 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 ZC3H3Q8IXZ2 948 aaKnown RBP20.17■□□□□ 0.82
COL9A3-205ENST00000466192 ACRBPQ8NEB7 543 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 CEP63Q96MT8 703 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 IRX2Q9BZI1 471 aaPredicted RBP20.17■□□□□ 0.82
COL9A3-205ENST00000466192 OLFML3Q9NRN5 406 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 SAMM50Q9Y512 469 aa20.17■□□□□ 0.82
COL9A3-205ENST00000466192 FAM13AO94988 1023 aa20.16■□□□□ 0.82
COL9A3-205ENST00000466192 SLU7O95391 586 aaKnown RBP20.16■□□□□ 0.82
COL9A3-205ENST00000466192 KNOP1Q1ED39 458 aaKnown RBP20.16■□□□□ 0.82
COL9A3-205ENST00000466192 NSUN6Q8TEA1 469 aaKnown RBP20.16■□□□□ 0.82
COL9A3-205ENST00000466192 OTUD5Q96G74 571 aa20.16■□□□□ 0.82
COL9A3-205ENST00000466192 DNAJC7Q99615 494 aa20.16■□□□□ 0.82
COL9A3-205ENST00000466192 ZSWIM4Q9H7M6 989 aa20.16■□□□□ 0.82
COL9A3-205ENST00000466192 BMT2Q1RMZ1 405 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 EDRF1Q3B7T1 1238 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 PPP4R3CPQ6ZMV5 832 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 NUP58Q9BVL2 599 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 URI1O94763 535 aaPredicted RBP20.15■□□□□ 0.82
COL9A3-205ENST00000466192 GCNT3O95395 438 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 CCNE2O96020 404 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 PPATQ06203 517 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 TSR1Q2NL82 804 aaKnown RBP20.15■□□□□ 0.82
COL9A3-205ENST00000466192 LBX2Q6XYB7 198 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 MYCT1Q8N699 235 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 ZC3H15Q8WU90 426 aaKnown RBP20.15■□□□□ 0.82
COL9A3-205ENST00000466192 PARVGQ9HBI0 331 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 KCND2Q9NZV8 630 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.15■□□□□ 0.823e-17■□□□□ 11.3
COL9A3-205ENST00000466192 TRAF3IP3Q9Y228 551 aa20.15■□□□□ 0.82
COL9A3-205ENST00000466192 V9GYY5 206 aaPredicted RBP20.15■□□□□ 0.82
COL9A3-205ENST00000466192 ARHGEF35A5YM69 484 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 RGS20O76081 388 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 QARSP47897 775 aaKnown RBP20.14■□□□□ 0.81
COL9A3-205ENST00000466192 ZNF131P52739 623 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 KCNA1Q09470 495 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 ADAM9Q13443 819 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 CCDC40Q4G0X9 1142 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 GADL1Q6ZQY3 521 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 ANKRD13AQ8IZ07 590 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 RETREG2Q8NC44 543 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 GPRASP2Q96D09 838 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 INPP4AQ96PE3 977 aaPredicted RBP20.14■□□□□ 0.81
COL9A3-205ENST00000466192 BTBD7Q9P203 1132 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 SIK3Q9Y2K2 1263 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 SCN4AP35499 1836 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 A0A0G2JLL6 359 aaPredicted RBP20.14■□□□□ 0.81
COL9A3-205ENST00000466192 NMT1P30419 496 aaKnown RBP20.14■□□□□ 0.81
COL9A3-205ENST00000466192 CASQ1P31415 396 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 MARSP56192 900 aaKnown RBP20.14■□□□□ 0.81
COL9A3-205ENST00000466192 UGCGQ16739 394 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 WDR59Q6PJI9 974 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 PRRT2Q7Z6L0 340 aaPredicted RBP20.14■□□□□ 0.81
COL9A3-205ENST00000466192 ERO1BQ86YB8 467 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 FIZ1Q96SL8 496 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 ODF2LQ9ULJ1 636 aa20.14■□□□□ 0.81
COL9A3-205ENST00000466192 PDXKO00764 312 aa20.13■□□□□ 0.81
COL9A3-205ENST00000466192 NR2F2P24468 414 aa20.13■□□□□ 0.81
COL9A3-205ENST00000466192 GUCY2CP25092 1073 aa20.13■□□□□ 0.81
COL9A3-205ENST00000466192 NF2P35240 595 aa20.13■□□□□ 0.81
COL9A3-205ENST00000466192 ANKRD7Q92527 254 aa20.13■□□□□ 0.81
COL9A3-205ENST00000466192 ERO1AQ96HE7 468 aa20.13■□□□□ 0.81
COL9A3-205ENST00000466192 GNA14O95837 355 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 TTLL12Q14166 644 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-205ENST00000466192 FIGNQ5HY92 759 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 PADI6Q6TGC4 694 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 DAW1Q8N136 415 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 PROCA1Q8NCQ7 364 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-205ENST00000466192 ASTN1O14525 1302 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 SPDYE5A6NIY4 337 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 CETN3O15182 167 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 LYPLA2O95372 231 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 ZBED6P86452 979 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 KRT76Q01546 638 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 MAPK7Q13164 816 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 ZC2HC1CQ53FD0 456 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-205ENST00000466192 NLRX1Q86UT6 975 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 TRIM59Q8IWR1 403 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 CCDC155Q8N6L0 562 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 CHST13Q8NET6 341 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 MAF1Q9H063 256 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms