RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 QARSP47897 775 aaKnown RBP22.8■■□□□ 1.24
PTCD3-206ENST00000465560 FXR2P51116 673 aaKnown RBP eCLIP22.8■■□□□ 1.24
PTCD3-206ENST00000465560 RBL2Q08999 1139 aa22.8■■□□□ 1.24
PTCD3-206ENST00000465560 TMEM266Q2M3C6 531 aa22.8■■□□□ 1.24
PTCD3-206ENST00000465560 MARCH8Q5T0T0 291 aa22.8■■□□□ 1.24
PTCD3-206ENST00000465560 CCDC155Q8N6L0 562 aa22.8■■□□□ 1.24
PTCD3-206ENST00000465560 CAGE1Q8TC20 777 aa22.8■■□□□ 1.24
PTCD3-206ENST00000465560 DHX38Q92620 1227 aaKnown RBP22.8■■□□□ 1.24
PTCD3-206ENST00000465560 TUBE1Q9UJT0 475 aa22.8■■□□□ 1.24
PTCD3-206ENST00000465560 PITPNM1O00562 1244 aa22.79■■□□□ 1.24
PTCD3-206ENST00000465560 DKC1O60832 514 aaKnown RBP eCLIP22.79■■□□□ 1.24
PTCD3-206ENST00000465560 IGBP1P78318 339 aa22.79■■□□□ 1.24
PTCD3-206ENST00000465560 BFSP2Q13515 415 aa22.79■■□□□ 1.24
PTCD3-206ENST00000465560 ZNF484Q5JVG2 852 aa22.79■■□□□ 1.24
PTCD3-206ENST00000465560 NEK9Q8TD19 979 aa22.79■■□□□ 1.24
PTCD3-206ENST00000465560 BADQ92934 168 aa22.79■■□□□ 1.24
PTCD3-206ENST00000465560 LBHD1Q9BQE6 289 aaPredicted RBP22.79■■□□□ 1.24
PTCD3-206ENST00000465560 EIF2AK1Q9BQI3 630 aaKnown RBP22.79■■□□□ 1.24
PTCD3-206ENST00000465560 CEP131Q9UPN4 1083 aa22.79■■□□□ 1.24
PTCD3-206ENST00000465560 UMODL1Q5DID0 1318 aa22.79■■□□□ 1.24
PTCD3-206ENST00000465560 ZBTB42B2RXF5 422 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 BMP15O95972 392 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 ZSCAN22P10073 491 aaPredicted RBP22.78■■□□□ 1.24
PTCD3-206ENST00000465560 CYP2C18P33260 490 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 MAGEA10P43363 369 aaPredicted RBP22.78■■□□□ 1.24
PTCD3-206ENST00000465560 MDM2Q00987 491 aaPredicted RBP22.78■■□□□ 1.24
PTCD3-206ENST00000465560 TRIM71Q2Q1W2 868 aaKnown RBP22.78■■□□□ 1.24
PTCD3-206ENST00000465560 MFSD5Q6N075 450 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 FAM173BQ6P4H8 233 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 TRAPPC12Q8WVT3 735 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 WNT8BQ93098 351 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 DYDC2Q96IM9 177 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 LXNQ9BS40 222 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 NRBP2Q9NSY0 501 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 RGL1Q9NZL6 768 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 SIP14410 1827 aa22.78■■□□□ 1.24
PTCD3-206ENST00000465560 LOXHD1Q8IVV2 1947 aa22.77■■□□□ 1.24
PTCD3-206ENST00000465560 STBD1O95210 358 aa22.77■■□□□ 1.24
PTCD3-206ENST00000465560 PKP1Q13835 747 aa22.77■■□□□ 1.24
PTCD3-206ENST00000465560 XKR3Q5GH77 459 aa22.77■■□□□ 1.24
PTCD3-206ENST00000465560 ARL6IP4Q66PJ3 421 aaKnown RBP22.77■■□□□ 1.24
PTCD3-206ENST00000465560 TAF2Q6P1X5 1199 aa22.77■■□□□ 1.24
PTCD3-206ENST00000465560 DTHD1Q6ZMT9 781 aa22.77■■□□□ 1.24
PTCD3-206ENST00000465560 TRMT1LQ7Z2T5 733 aaKnown RBP22.77■■□□□ 1.24
PTCD3-206ENST00000465560 GDF15Q99988 308 aa22.77■■□□□ 1.24
PTCD3-206ENST00000465560 HSD17B14Q9BPX1 270 aa22.77■■□□□ 1.24
PTCD3-206ENST00000465560 RAB34Q9BZG1 259 aa22.77■■□□□ 1.24
PTCD3-206ENST00000465560 WNT8AQ9H1J5 351 aa22.77■■□□□ 1.24
PTCD3-206ENST00000465560 WRAP73Q9P2S5 460 aaPredicted RBP22.77■■□□□ 1.24
PTCD3-206ENST00000465560 SLITRK3O94933 977 aa22.76■■□□□ 1.23
PTCD3-206ENST00000465560 F13A1P00488 732 aa22.76■■□□□ 1.23
PTCD3-206ENST00000465560 CYP4A11Q02928 519 aa22.76■■□□□ 1.23
PTCD3-206ENST00000465560 SF3A1Q15459 793 aaKnown RBP22.76■■□□□ 1.23
PTCD3-206ENST00000465560 C4orf19Q8IY42 314 aa22.76■■□□□ 1.23
PTCD3-206ENST00000465560 TMEM199Q8N511 208 aa22.76■■□□□ 1.23
PTCD3-206ENST00000465560 IGSF22Q8N9C0 903 aa22.76■■□□□ 1.23
PTCD3-206ENST00000465560 NIFKQ9BYG3 293 aaKnown RBP22.76■■□□□ 1.23
PTCD3-206ENST00000465560 ZSWIM4Q9H7M6 989 aa22.76■■□□□ 1.23
PTCD3-206ENST00000465560 SEPT9Q9UHD8 586 aaPredicted RBP22.76■■□□□ 1.23
PTCD3-206ENST00000465560 CAND2O75155 1236 aa22.75■■□□□ 1.23
PTCD3-206ENST00000465560 CKBP12277 381 aa22.75■■□□□ 1.23
PTCD3-206ENST00000465560 CTTNQ14247 550 aaKnown RBP22.75■■□□□ 1.23
PTCD3-206ENST00000465560 PDIA5Q14554 519 aa22.75■■□□□ 1.23
PTCD3-206ENST00000465560 IL17AQ16552 155 aa22.75■■□□□ 1.23
PTCD3-206ENST00000465560 MTHFD1LQ6UB35 978 aa22.75■■□□□ 1.23
PTCD3-206ENST00000465560 RUFY4Q6ZNE9 571 aa22.75■■□□□ 1.23
PTCD3-206ENST00000465560 RETREG2Q8NC44 543 aa22.75■■□□□ 1.23
PTCD3-206ENST00000465560 ERMNQ8TAM6 284 aa22.75■■□□□ 1.23
PTCD3-206ENST00000465560 FTOQ9C0B1 505 aaKnown RBP eCLIP22.75■■□□□ 1.23
PTCD3-206ENST00000465560 PCDHA2Q9Y5H9 948 aa22.75■■□□□ 1.23
PTCD3-206ENST00000465560 RANBP2P49792 3224 aaKnown RBP22.75■■□□□ 1.23
PTCD3-206ENST00000465560 LYPLA2O95372 231 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 SELPP16109 830 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 KLRC1P26715 233 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 CCL23P55773 120 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 FPGSQ05932 587 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 TARBP2Q15633 366 aaKnown RBP22.74■■□□□ 1.23
PTCD3-206ENST00000465560 FOXD4L5Q5VV16 416 aaPredicted RBP22.74■■□□□ 1.23
PTCD3-206ENST00000465560 HAUS3Q68CZ6 603 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 ANO5Q75V66 913 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 RPAINQ86UA6 219 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 TPH2Q8IWU9 490 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 TET1Q8NFU7 2136 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 FOXD4L4Q8WXT5 416 aaPredicted RBP22.74■■□□□ 1.23
PTCD3-206ENST00000465560 ZBTB10Q96DT7 871 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 POLR3CQ9BUI4 534 aaPredicted RBP22.74■■□□□ 1.23
PTCD3-206ENST00000465560 TUFT1Q9NNX1 390 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 LRWD1Q9UFC0 647 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 CLIC4Q9Y696 253 aa22.74■■□□□ 1.23
PTCD3-206ENST00000465560 TMEM150BA6NC51 233 aa22.73■■□□□ 1.23
PTCD3-206ENST00000465560 DDX11L8A8MPP1 907 aa22.73■■□□□ 1.23
PTCD3-206ENST00000465560 C22orf31O95567 290 aa22.73■■□□□ 1.23
PTCD3-206ENST00000465560 RPLP2P05387 115 aaKnown RBP22.73■■□□□ 1.23
PTCD3-206ENST00000465560 IQCF3P0C7M6 154 aa22.73■■□□□ 1.23
PTCD3-206ENST00000465560 SPATA31C1P0DKV0 1188 aa22.73■■□□□ 1.23
PTCD3-206ENST00000465560 YWHABP31946 246 aaKnown RBP22.73■■□□□ 1.23
PTCD3-206ENST00000465560 BMP8BP34820 402 aa22.73■■□□□ 1.23
PTCD3-206ENST00000465560 THPOP40225 353 aa22.73■■□□□ 1.23
PTCD3-206ENST00000465560 PPIGQ13427 754 aaKnown RBP eCLIP22.73■■□□□ 1.234e-7■□□□□ 10
PTCD3-206ENST00000465560 PTPAQ15257 358 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms